| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0547 |
|---|
| Symbol | |
|---|
| ID | 4687829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 576594 |
|---|
| End bp | 577703 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639833542 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_980788 |
|---|
| Protein GI | 121603459 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG AACAGATCAA ATTCGCCTAC TGGGTGCCCA ACGTCAGCGG CGGCCTTGTT
GTCAGCAAGA TCGAGCAGCG CACCAGCTGG AACATCGACT ACAACCGCAA ACTGGCGCAA
ACCGCCGAAA AAGCCGGCTT TGAATACGCG CTGTCGCAGA TTCGTTTCAC CGCCGGTTAC
GGCGCTGAAT TCCAGCACGA GTCGGTGGCC ATCAGCCACG CCTTACTGGC GGCCACCGAT
AAACTGCGCG TCATCGCCGC GATTCTGCCC GGCCCCTGGA ATCCGGTGGT GCTGGCCAAG
CAGATTGCCA CCATCGACCA CCTGACCAAT GGGCGCGTCG CCGTCAACAT CGTCTCCGGC
TGGTTCCGGG GCGAGTTCCA GGCGATTGGC GAACCGTGGC TGGAGCATGA TGAGCGCTAC
CGCCGCTCCG AGGAGTTCAT CGAGGTGCTC AAGGGCATCT GGACCACCGA CAACTTCAGC
TACCAAGGCG ACTTTTACCG CATTCACAAC TACAGCCTCA AGCCCAAGCC GCTGCAGCAA
GCGCCGCATC CTGAAATTTT CCAGGGCGGC AGTTCACGCG CGGCGCGCGA CATGGCTTCG
CGCGTGTCCG ACTGGTACTT CACCAATGGC AACACAGTCG AAGGCATCCA GGCCCAGGTG
GACGATATCC GCGCCAAGGC TGCAGCCAAT GGCCACAGCG TCAAGGTGGG CGTGAACGCC
TTCATCATCG CCCGCGACAC CGAGCAAGAA GCGCGTGCCG TGCTGGCCGA GATCATTGAA
AAGGCCGACC CGGAAGCGGT CAACGCCTTT GGCCACGAGG TCAAACAGGC CGGCAAGGCC
AGCCCGGAAG GCGAGGGCAA TTGGGCCAAG TCCACGTTTG AAGACCTGGT GCAGTACAAC
GACGGCTTCA AGACCAACCT GATCGGCACG CCGCAGCAGA TCGCCGAGCG CATCGTCGCG
CTCAAGGCCG TCGGCGTGGA CCTGATACTC AGCGGCTTTT TGCACTTTCA GGAAGAGGTC
GCCTACTTCG GCGATAAAGT GCTGCCGCTG GTGCGCGAGC TGGAGCGCGA GCTGCAAGCC
GAACCGGTTC CCCTGAAGCT GGCAGCCTGA
|
|---|
| Protein sequence | MSQEQIKFAY WVPNVSGGLV VSKIEQRTSW NIDYNRKLAQ TAEKAGFEYA LSQIRFTAGY
GAEFQHESVA ISHALLAATD KLRVIAAILP GPWNPVVLAK QIATIDHLTN GRVAVNIVSG
WFRGEFQAIG EPWLEHDERY RRSEEFIEVL KGIWTTDNFS YQGDFYRIHN YSLKPKPLQQ
APHPEIFQGG SSRAARDMAS RVSDWYFTNG NTVEGIQAQV DDIRAKAAAN GHSVKVGVNA
FIIARDTEQE ARAVLAEIIE KADPEAVNAF GHEVKQAGKA SPEGEGNWAK STFEDLVQYN
DGFKTNLIGT PQQIAERIVA LKAVGVDLIL SGFLHFQEEV AYFGDKVLPL VRELERELQA
EPVPLKLAA
|
|---|
| |