| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0529 |
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| Symbol | |
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| ID | 4687480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 558214 |
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| End bp | 559257 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833525 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_980771 |
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| Protein GI | 121603442 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.438898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.151097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC GGTACGCTAT TCATGCTTTC AGCGCATTAA TCAGCCGACC TCTTCCTTCC
ATCCCCATGC AGCATCCACA CCCCCATTTG CGTTCCCGGC CGATTGCCGC CGGGCAACTG
CGCGCCTTCG AGGCGGTGGC CCGCCACCTC AATTTCCGCG CCGCCTCCGA AGAGCTGTCG
CTGACCCAGT CGGCCGTCAG CAGGCAGATC CAGAGCCTGG AGGAAGACGT TGGCGTCAGC
CTGTTTCTTC GCCACACGCG GGCTGTCGAA CTCACCAGCG CGGGCGCGCA GCTGCTGCGC
GCCGTGCTGC CCTCGCTGGA GCGCATTGAT GGCGTGGTGC GCATGATCCG GCAAAGCGCC
GGCCGCAAAA GCGTGGCCAT CAGCACCTGG GCGTCGTTTG CCTCGATGTG GCTGATTCCC
CGGCTGGAGG CCTTTCAGCG CGAGCACCCC GACATCGACA TCCGCATTGA TGCGACCGAC
ACCCCGGTGG ACCTGGAAAC CACCGACGTG GACCTGGCCC TGCGCTACAG CATGCCGGCC
AGCGTGCCGG CGCAGGCGCG GCGCCTGTTC GGCGAGCAGC TCACGCCGGT CATCAGCCCC
TGGCTGCTCA AGAGCGGCCC GCGCCTGCAA AATGCGCAGG ATCTGGCCCG GTTTGCGCTG
GTCGAAGCCA GCGACGCGCA CCGCACCCAG CACATGGAAT GGCTGAGCTG GCAGCGCTGG
TTTGACATGC AGGGCTTGCG GCGTTTCGAG CCCAAGCGCT GGCTGTATTT CAACTATGCC
CACCAGATCG CCCAGGCGGC CCTGACCGGC CAGGGCGTGG CGCTGGCGCG CATGCCCTTG
ATTGCCGAGA GCCTGGCCAG TGGCGACCTG GTCGAGGTCT TGCCGGACCG GCGCATGGAC
TCGCCGATGG CTTACTGGCT GATCGTCGGG CCGCGCAATG CCGCACGGCC CGAGGTGCAG
GCGTTTTGCA GCTGGATCGA AGCGCAGGCG GCACAGACGC GCGAGGCGAT TGGCGACGTT
CCACCCGCTG CGCCAGCCAG ATAA
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| Protein sequence | MKSRYAIHAF SALISRPLPS IPMQHPHPHL RSRPIAAGQL RAFEAVARHL NFRAASEELS
LTQSAVSRQI QSLEEDVGVS LFLRHTRAVE LTSAGAQLLR AVLPSLERID GVVRMIRQSA
GRKSVAISTW ASFASMWLIP RLEAFQREHP DIDIRIDATD TPVDLETTDV DLALRYSMPA
SVPAQARRLF GEQLTPVISP WLLKSGPRLQ NAQDLARFAL VEASDAHRTQ HMEWLSWQRW
FDMQGLRRFE PKRWLYFNYA HQIAQAALTG QGVALARMPL IAESLASGDL VEVLPDRRMD
SPMAYWLIVG PRNAARPEVQ AFCSWIEAQA AQTREAIGDV PPAAPAR
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