| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0497 |
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| Symbol | |
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| ID | 4687900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 524874 |
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| End bp | 526469 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833493 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_980739 |
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| Protein GI | 121603410 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA AAGTCGTCAT CGGGTTTCTC GGCAGCCAGC TCGATTCAGG CCTGGGCGCG
GCGCGCTGGG ACAAGTGGCG ACCCACGGTC TCGCTGGCGC AGCATGACGA CCTGCAGGTG
GACCGGCTGG AGCTGCTTCA CGATGTGCGC TACCTGGCGC TGGCGCGCAC GGTGCAGGCC
GACATCGCGC AGCTCTCGCC CGGCACCGAG GTGCGCCTGA GCGAGATGAA CCTGGCCAAT
CCCTGGGACT TTGGCGAGGT CTATGGCGCG CTGTACGACT GGCTCAAGAC TTACCCGTTT
GAGCTGGAGC AGGAAGACTA CTGGGCGCAC ATCACCACCG GCACCCATGT GGCGCAGATC
TGCCTGTTCC TGATGGTCGA GGCGCGCCTG ATTCCGGGCG TTCTGCTGCA GACCGCACCG
CCGCGCCGGC AGGGCAGTCA GGCAGCCGGC AGCTATGAAT TGATTGACCT GGACCTGTCG
CGCTATGACG CCATCAACAC CCGGCTGCGC AGCGCCCGGC AGGATGCGGT GTCGTTCCTG
AAAAGCGGGA TTGCCACGCG CAACCCCCGC TTCAACGCCC TGATCGAGGA AATCGAGCGC
GTCGCCGTGC GCAGCACCGC GCCCATCCTG CTGACCGGCC CGACCGGCGC CGGTAAATCC
ATGCTGGCCC GGCGCATGTA CGAGCTGAAA AAATCGCGCC ACCAGGTCAG CGGCGCTTTT
GTCGATGTCA ACTGCGCCAC ACTGCGCGGG GACGGGGCGG TATCGGCCCT GTTCGGCCAC
AGGAAGGGCG CTTTCACGGG TGCGGCCATG GAGCGGGCCG GCTTGCTGAA AACGGCGCAC
CAGGGCGTGC TATTTCTGGA CGAGATCGGC GAGTTGGGCT GCGACGAACA GGCCATGCTG
CTCAAGGCCG TGGAAGAGCG GCGCTTCCTG CCGCTGGGCT CGGACGCCGA GGTGCAGAGC
GATTTCCAGC TGATCGCCGG CACCAACAAG GATCTGCGTA CCGAGGTGGC TTGCGGGCGC
TTTCGCGAAG ACCTGCTGGC GCGCATCAAC CTGTGGTCCT ATGTGCTGCC CGGCCTGGCG
CAGCGCCGGG AAGACATTGA ACCCAATATT GATCACCAGC TGGCCATCGC CTCGCAGGAG
TTGGGGCGGC AGGTGCGTTT TACCCGCGAG GCACGGGCCG ACTACCTGGG CTTTGCCCAG
TCCGGCGAAG CGCTGTGGAG CGGTAATTTC CGCGACTTGA GCGCCTCGGC CACGCGGCTG
GCGACGCTGG CGGAAAACGG CCGCATTGGC GTTGAGCTGG TCCAGGCCGA GAAGGCGCGC
CTGCGCTGGC TGTGGGACAA ACACCCGGCC CGCGATGCGG CCAGTGACGT GTCGCTGCAT
GACCTCATGG GCGCAGCGGC AGAGCAGCTT GATGCGTTTG ACCGGCTTCA GCTGCAGGCG
GTGATTGGGA TTTGCCGCCA GCAGGCCAGC CTGAGCGAGG CCGGGCGCGC TTTGTTCAAT
GTCTCGCGCA ACCAGCGCGC CGTGATCAAC GATGCGGACC GGCTGCGCAA ATACCTGCTC
AAGTTCGGCT TGACGTGGGA ACAAATCCGC ACCTGA
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| Protein sequence | MKRKVVIGFL GSQLDSGLGA ARWDKWRPTV SLAQHDDLQV DRLELLHDVR YLALARTVQA
DIAQLSPGTE VRLSEMNLAN PWDFGEVYGA LYDWLKTYPF ELEQEDYWAH ITTGTHVAQI
CLFLMVEARL IPGVLLQTAP PRRQGSQAAG SYELIDLDLS RYDAINTRLR SARQDAVSFL
KSGIATRNPR FNALIEEIER VAVRSTAPIL LTGPTGAGKS MLARRMYELK KSRHQVSGAF
VDVNCATLRG DGAVSALFGH RKGAFTGAAM ERAGLLKTAH QGVLFLDEIG ELGCDEQAML
LKAVEERRFL PLGSDAEVQS DFQLIAGTNK DLRTEVACGR FREDLLARIN LWSYVLPGLA
QRREDIEPNI DHQLAIASQE LGRQVRFTRE ARADYLGFAQ SGEALWSGNF RDLSASATRL
ATLAENGRIG VELVQAEKAR LRWLWDKHPA RDAASDVSLH DLMGAAAEQL DAFDRLQLQA
VIGICRQQAS LSEAGRALFN VSRNQRAVIN DADRLRKYLL KFGLTWEQIR T
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