| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0441 |
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| Symbol | |
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| ID | 4687998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 459474 |
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| End bp | 460394 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833438 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_980684 |
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| Protein GI | 121603355 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.253414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA GGCAACTCGA AGTCTTTCAG GCCGTCATGC AAACCGGCAA CATGAGCGCG
GCCGCGCGGC TGATCTGCAT CACGCCCTCG GCGGTCAGCA AAACCATCGG GCACACCGAG
CTGCAACTGG GCTACAAGCT GTTCGTCAGG GCCAAGGGCA CGCTGGCGCC CACGCCCGAG
GCGCGCGTGC TGTTCGAAGA GTCCACCCTG ATCCACCGCA AGCTCGATGA ACTCAAGCGC
ATGGCCATCA ACCTGCGCCA GGTCGATGGC GGACAGGTGC GGCTGGCGGC CCTTCCGTCG
ATCAGCCACG AGTTCTTGCC GCTGGTGCTG GAGCAGCATT TGACGCGCTA TCCGCGCGTC
AATGTGGAGG TGCGCACGCT GCACCAGGAC CAGATGGTCG AGGCGCTGCT GACCCGGCGC
GTGGACTTTG CGCTGGGTTT TTACACGCAT CCGCACCCGC TGCTGACCAA TACCGTGCTG
GTGAGCGGGC TGCTGCACCT GGTCGTCAAG GCCGACATCT GGGAGCGCGC GGTGCGGGCG
CGGCGCCAGA ACCCGATGTC TTTCCTGACC AGCATGCCGC TGGTCCGGCT GGTGGGCGAA
GACCCGATGT GCCAGTCGAT TGACGCGCTG GCCCGCCACT TGGGGCACAC GGCAACGACA
GGCCTGCAGG TGCATACCTC GCGGCTGGCG CTGGAACTGG TCAGGCGGGG CATGGGCTGG
ACGGTGGTGG ACTTCCTGAC CGCCCGCAAT CTCGATGCGT CGCTCACGGC CGTGCCGCTG
CATGACTTTG CGTCGATTTC GCTGCAGATG TATGTGGCCA CCAGCACGCC GCCCAGCCAG
GATGCCCTGC GCATGGTCGG CATGCTGCCC GGCCTGCTGC ACCAGATGAT GGAAAGCAGC
CCGCCGCCCC GCCGGGAATG A
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| Protein sequence | MNLRQLEVFQ AVMQTGNMSA AARLICITPS AVSKTIGHTE LQLGYKLFVR AKGTLAPTPE
ARVLFEESTL IHRKLDELKR MAINLRQVDG GQVRLAALPS ISHEFLPLVL EQHLTRYPRV
NVEVRTLHQD QMVEALLTRR VDFALGFYTH PHPLLTNTVL VSGLLHLVVK ADIWERAVRA
RRQNPMSFLT SMPLVRLVGE DPMCQSIDAL ARHLGHTATT GLQVHTSRLA LELVRRGMGW
TVVDFLTARN LDASLTAVPL HDFASISLQM YVATSTPPSQ DALRMVGMLP GLLHQMMESS
PPPRRE
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