| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0437 |
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| Symbol | |
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| ID | 4687679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 452337 |
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| End bp | 455729 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833434 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_980680 |
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| Protein GI | 121603351 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.454643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG GCGCCAGGCC GCTGGCCATG ACCTTTTCGC TGCGCACGGT CCTGATCACC
AGCCTGCTGC TGTTTTCCCT GCTTCCCGCC GGGGTGGTGG GCTGGTTTTT GTACCGCAGC
AACCTGCAAA GCGTGGAGCT GCTGTCCGGG AAAATCATCG AAGACATGAC GCAGCGCATC
AAAACCGATG TGCAAGGCCA TCTGGCGCAA GCCCATGTCG TGCTGAATGG CCTGATTCAC
GAGCAGCCCG ATGTGTCCGC CGTGCGGCGC GCGCGCCAGT TGATCGAGTC GCCCGCACTG
TTCGAGCAAA CCGCTTTTGC CATGACGCGC ATGACGCCCG ATGTTCCCCG AATGTATGTG
GGAAGCGCGC GCGGAGAGTT CCTGAGCGTT GAAACCTTTG CTCAGGACGC CAGCACCCGG
GTGCGCGTGA GCGAGCGCAA GGAGGGCGGC GACGGCCGGG GCCTTTTCAT GGCCGAATCT
CCGGGCGACC GCCGCCATGG CCTGCCGGCG GAAAAGGGCG GCTATGACCC GCGCAGCCGG
CCCTGGTACA GGGCCGCGAT GGACAACAAG GGCCGGGCTT TCACGCCGAT ATCGGTCCTG
GCCGCCGACC GGCAACTGCG CCTCACGCTG GCGCAGCCCG TCTATGGCGC TGACGGCGGC
GCCCTGGGCG TGTTTGCCGT TGACCTGCCC CTGAAAAGCC TGAACCAGAT GCTGCAGAGC
ATGCGAATCA GCGCCCGTGG CGCGGTTTTT CTGGTCGATG AGCAGGGTTT CATGGTCGCC
AGCTCGACCG GCGATGAACT GTTTTCCGGC GGTGCCGGTA ATTTGCAGCG CCACAAGCCG
CTGCAAAGCC GCAACCCCAT CATTCGCCAG GCCTACGGCG AAGCCGCGCC CAGCCTGGGG
CAGACGCTGG AGTCCAGCGT GCAGCGCGTG TCGTTCCTGC GCCGCATTTC CATGGCGGAC
GACACGCTGA TGGTGGCCCT GCAGCCCTTT GGTGAAAGCA TGGGCGTGCG CTGGAGCCTG
GTGGTGGCCG CGCCCGAGAG CGACTTCACC GCCGTGGCCC AGGCGGCGCT GAAAAAAACG
CTGGCGGTGA CGGCCCTGAT CCTGCTGCTC GGCGCCTTGC TGGCCATCGC GCTGGCCTGG
CGGCTGAGCC GCCACTTCAG GCGCCTGGGC GAAGCTGCCG CGCTGCTGGC ACTGGGCGAA
GTGCCACCGG TGCAGCCGGC CAGCCGCATC GCCGAAGTGC GCCAGCTGTC CCAGACCCTG
CACGACAGCG CCGGGGAACT GCAGCGCCAC CGCGCTGCCA TCCAGGCGCA GACCCTGGCC
CTGCACGAGG CCAACGAAAC GCTGGAAGAC CGGGTGGCCA GCCGCACCGC CGAGCTGAAC
GCTTCGCGTG ACGAAGCCCT GGGCGCGGCG CGCGCCAAGG CGGCATTCCT GGCCGCCATG
AGCCATGAAA TCCGCACCCC GCTTAACGGC GTGGTCGGCA TGACCACCCT GCTGGCCGAC
ACGCCGCTGG ACCTGGAACA GCGCGACTAT GTCCACACCA TGCGCATTTC CAGCGACCAG
TTGCTGGGCG TCATCAACGA CATCCTGGAT TTTTCCAAGA TCGAGTCCGG CAAGCTGGAG
CTGGAAAACG AGCCGCTGAA CCTGCTCGCA ACGATTGAGG AGGCCTGCGA CATCGGCGCG
CCGCGCGCCC GCGAAAAAGG CCTGGAGCTG CTGGTGGACC TGGGCGACGA GCTGCCCGGC
TGGGTGCGCG GCGACGTGAC CCGCCTGCGC CAGATACTGC TCAACCTGGT CAACAACGCC
GTCAAGTTCA CCGAAAAAGG CCAGGTGGTG GTCTCGGCCC ATGTGCTCGA AGACTTCAGC
CCGGGCCGGG GCGGGCTGGT CGAGTTCCGC ATCAAGGACA GCGGCATCGG CATTGAGCCG
GACCGCCAGG CCGCGCTGTT CCAGTCCTTT GTCCAGGTCG ATGCCAGCAC CACCCGCAAA
TACGGCGGCA CCGGGCTGGG CCTGGCGATC TGCCAGCGGC TGGTCAGGCT GATGGGCGGC
CAGATCGGGC TGGAGTCGGC GCCCGGCGAC GGCTCGACCT TCTGGTTCAC CGCCCGGCTG
GGGCATGCGG ATGCGCCCGA AGTCGCCATG CTGTCGGCGC TGCACCTGGT CAGCCTGGCC
GGCAAGCGGG TGGCGGTGCT GGACGACACA CAGCTCAACC TGCGCATCCT GGACAAGCAG
CTCAGGCGCT GGGGCATGCA GCCTGTGCTG TTCGAGCGCG CCGCCGAGGC CCTGGCCTGG
CTGGCCGGAA ATCCGGTCGA TGTGGTGATC AGCGACATGC ACATGCCCGA GATGGACGGC
TTGAGCTTTG CCCGGCTGCT GCGCGAGCGC ACGCCCGCCA CGCCCATCGT GCTGCTGACC
TCGGGCACCA TGCCCAGCGG CGAGCAGGCG CGGGTGTTCG ATGCCCGGCT GCTCAAGCCA
TACCGCCAGT CACAGCTGTT TGAGTCCCTT GCGCGCGTCA CGTCTGCCCC GGTAGAGGTA
CAAAAAGTAG CCAGGTCGGA GCCGGCCGCA GCCCGCAACC AGTTCATCCT GGTGGCCGAC
GACAACGCCA TCAACCTCAA GGTCGCGCTG GCCATGCTCG CCAAGCTGGG CTACGAGGCC
GCCACGGCGG TCAACGGCAG CGAAGCCGTG GACCGGGTTG CCGCCTCGCT GCGCACCGGC
CTTGGCGAGA CGCCGCGCCA GTACGCCGCC ATCCTGATGG ATGCCAACAT GCCGGTGATG
GACGGCTTTG TCGTCTCGCG CCTGATCATC AGTACCCACG GCACGCAGGC GCCGCCTATC
ATCGCGCTGA CCGCCTCGGT GCTGGAAGAA GACCGCCAGC GCTGCCTGCA GGCCGGCATG
GTGGGCTTTT TGCCCAAGCC GCTGCGGATT GACGAATTGT CCGAGTCGCT GGCGCGTTAT
GCCCGGCAGG CCGAGCCCGA AAATGCTACG AAAATAATAG CTGCAGACGC CGTGCCTGAT
GCGCAAGATG CTCAATCGGG CATTAAACCG GAGCAGGTGC TGATCGACTG GAACCGGCTG
GAGCAGTTTC GGGAGTTTGA CGACGACGAA CTCAGCATGA CGCGCGAGGT GGTGCTGCTC
TTCATCACCG AGATGCCCCA GCGCATCGAC GACATCCGGG GCGCCTTGTC GGCCTGCGAC
AGCGCCGCCT TGTCTCGCGC TGCCCATGCG CTCAAGGGCG CGGCGTCCAA TGTGGGCGCG
CAAGCCTTGA GCGGTGCCTG CGCTGCCCTG GAGCAGTCGT GCCTGCAGGG CCAATGGCCT
GCGGACGCGG CGCTGCAGGT TGCGGCGCTG GTGGCGTTTG CCGACCAGAC CTGCCAGGCG
CTCAAGGGCT GGACGGCGGC GCAGGCGGCC TAG
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| Protein sequence | MSSGARPLAM TFSLRTVLIT SLLLFSLLPA GVVGWFLYRS NLQSVELLSG KIIEDMTQRI
KTDVQGHLAQ AHVVLNGLIH EQPDVSAVRR ARQLIESPAL FEQTAFAMTR MTPDVPRMYV
GSARGEFLSV ETFAQDASTR VRVSERKEGG DGRGLFMAES PGDRRHGLPA EKGGYDPRSR
PWYRAAMDNK GRAFTPISVL AADRQLRLTL AQPVYGADGG ALGVFAVDLP LKSLNQMLQS
MRISARGAVF LVDEQGFMVA SSTGDELFSG GAGNLQRHKP LQSRNPIIRQ AYGEAAPSLG
QTLESSVQRV SFLRRISMAD DTLMVALQPF GESMGVRWSL VVAAPESDFT AVAQAALKKT
LAVTALILLL GALLAIALAW RLSRHFRRLG EAAALLALGE VPPVQPASRI AEVRQLSQTL
HDSAGELQRH RAAIQAQTLA LHEANETLED RVASRTAELN ASRDEALGAA RAKAAFLAAM
SHEIRTPLNG VVGMTTLLAD TPLDLEQRDY VHTMRISSDQ LLGVINDILD FSKIESGKLE
LENEPLNLLA TIEEACDIGA PRAREKGLEL LVDLGDELPG WVRGDVTRLR QILLNLVNNA
VKFTEKGQVV VSAHVLEDFS PGRGGLVEFR IKDSGIGIEP DRQAALFQSF VQVDASTTRK
YGGTGLGLAI CQRLVRLMGG QIGLESAPGD GSTFWFTARL GHADAPEVAM LSALHLVSLA
GKRVAVLDDT QLNLRILDKQ LRRWGMQPVL FERAAEALAW LAGNPVDVVI SDMHMPEMDG
LSFARLLRER TPATPIVLLT SGTMPSGEQA RVFDARLLKP YRQSQLFESL ARVTSAPVEV
QKVARSEPAA ARNQFILVAD DNAINLKVAL AMLAKLGYEA ATAVNGSEAV DRVAASLRTG
LGETPRQYAA ILMDANMPVM DGFVVSRLII STHGTQAPPI IALTASVLEE DRQRCLQAGM
VGFLPKPLRI DELSESLARY ARQAEPENAT KIIAADAVPD AQDAQSGIKP EQVLIDWNRL
EQFREFDDDE LSMTREVVLL FITEMPQRID DIRGALSACD SAALSRAAHA LKGAASNVGA
QALSGACAAL EQSCLQGQWP ADAALQVAAL VAFADQTCQA LKGWTAAQAA
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