Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0437 |
Symbol | |
ID | 4687679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 452337 |
End bp | 455729 |
Gene Length | 3393 bp |
Protein Length | 1130 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833434 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_980680 |
Protein GI | 121603351 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.454643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAG GCGCCAGGCC GCTGGCCATG ACCTTTTCGC TGCGCACGGT CCTGATCACC AGCCTGCTGC TGTTTTCCCT GCTTCCCGCC GGGGTGGTGG GCTGGTTTTT GTACCGCAGC AACCTGCAAA GCGTGGAGCT GCTGTCCGGG AAAATCATCG AAGACATGAC GCAGCGCATC AAAACCGATG TGCAAGGCCA TCTGGCGCAA GCCCATGTCG TGCTGAATGG CCTGATTCAC GAGCAGCCCG ATGTGTCCGC CGTGCGGCGC GCGCGCCAGT TGATCGAGTC GCCCGCACTG TTCGAGCAAA CCGCTTTTGC CATGACGCGC ATGACGCCCG ATGTTCCCCG AATGTATGTG GGAAGCGCGC GCGGAGAGTT CCTGAGCGTT GAAACCTTTG CTCAGGACGC CAGCACCCGG GTGCGCGTGA GCGAGCGCAA GGAGGGCGGC GACGGCCGGG GCCTTTTCAT GGCCGAATCT CCGGGCGACC GCCGCCATGG CCTGCCGGCG GAAAAGGGCG GCTATGACCC GCGCAGCCGG CCCTGGTACA GGGCCGCGAT GGACAACAAG GGCCGGGCTT TCACGCCGAT ATCGGTCCTG GCCGCCGACC GGCAACTGCG CCTCACGCTG GCGCAGCCCG TCTATGGCGC TGACGGCGGC GCCCTGGGCG TGTTTGCCGT TGACCTGCCC CTGAAAAGCC TGAACCAGAT GCTGCAGAGC ATGCGAATCA GCGCCCGTGG CGCGGTTTTT CTGGTCGATG AGCAGGGTTT CATGGTCGCC AGCTCGACCG GCGATGAACT GTTTTCCGGC GGTGCCGGTA ATTTGCAGCG CCACAAGCCG CTGCAAAGCC GCAACCCCAT CATTCGCCAG GCCTACGGCG AAGCCGCGCC CAGCCTGGGG CAGACGCTGG AGTCCAGCGT GCAGCGCGTG TCGTTCCTGC GCCGCATTTC CATGGCGGAC GACACGCTGA TGGTGGCCCT GCAGCCCTTT GGTGAAAGCA TGGGCGTGCG CTGGAGCCTG GTGGTGGCCG CGCCCGAGAG CGACTTCACC GCCGTGGCCC AGGCGGCGCT GAAAAAAACG CTGGCGGTGA CGGCCCTGAT CCTGCTGCTC GGCGCCTTGC TGGCCATCGC GCTGGCCTGG CGGCTGAGCC GCCACTTCAG GCGCCTGGGC GAAGCTGCCG CGCTGCTGGC ACTGGGCGAA GTGCCACCGG TGCAGCCGGC CAGCCGCATC GCCGAAGTGC GCCAGCTGTC CCAGACCCTG CACGACAGCG CCGGGGAACT GCAGCGCCAC CGCGCTGCCA TCCAGGCGCA GACCCTGGCC CTGCACGAGG CCAACGAAAC GCTGGAAGAC CGGGTGGCCA GCCGCACCGC CGAGCTGAAC GCTTCGCGTG ACGAAGCCCT GGGCGCGGCG CGCGCCAAGG CGGCATTCCT GGCCGCCATG AGCCATGAAA TCCGCACCCC GCTTAACGGC GTGGTCGGCA TGACCACCCT GCTGGCCGAC ACGCCGCTGG ACCTGGAACA GCGCGACTAT GTCCACACCA TGCGCATTTC CAGCGACCAG TTGCTGGGCG TCATCAACGA CATCCTGGAT TTTTCCAAGA TCGAGTCCGG CAAGCTGGAG CTGGAAAACG AGCCGCTGAA CCTGCTCGCA ACGATTGAGG AGGCCTGCGA CATCGGCGCG CCGCGCGCCC GCGAAAAAGG CCTGGAGCTG CTGGTGGACC TGGGCGACGA GCTGCCCGGC TGGGTGCGCG GCGACGTGAC CCGCCTGCGC CAGATACTGC TCAACCTGGT CAACAACGCC GTCAAGTTCA CCGAAAAAGG CCAGGTGGTG GTCTCGGCCC ATGTGCTCGA AGACTTCAGC CCGGGCCGGG GCGGGCTGGT CGAGTTCCGC ATCAAGGACA GCGGCATCGG CATTGAGCCG GACCGCCAGG CCGCGCTGTT CCAGTCCTTT GTCCAGGTCG ATGCCAGCAC CACCCGCAAA TACGGCGGCA CCGGGCTGGG CCTGGCGATC TGCCAGCGGC TGGTCAGGCT GATGGGCGGC CAGATCGGGC TGGAGTCGGC GCCCGGCGAC GGCTCGACCT TCTGGTTCAC CGCCCGGCTG GGGCATGCGG ATGCGCCCGA AGTCGCCATG CTGTCGGCGC TGCACCTGGT CAGCCTGGCC GGCAAGCGGG TGGCGGTGCT GGACGACACA CAGCTCAACC TGCGCATCCT GGACAAGCAG CTCAGGCGCT GGGGCATGCA GCCTGTGCTG TTCGAGCGCG CCGCCGAGGC CCTGGCCTGG CTGGCCGGAA ATCCGGTCGA TGTGGTGATC AGCGACATGC ACATGCCCGA GATGGACGGC TTGAGCTTTG CCCGGCTGCT GCGCGAGCGC ACGCCCGCCA CGCCCATCGT GCTGCTGACC TCGGGCACCA TGCCCAGCGG CGAGCAGGCG CGGGTGTTCG ATGCCCGGCT GCTCAAGCCA TACCGCCAGT CACAGCTGTT TGAGTCCCTT GCGCGCGTCA CGTCTGCCCC GGTAGAGGTA CAAAAAGTAG CCAGGTCGGA GCCGGCCGCA GCCCGCAACC AGTTCATCCT GGTGGCCGAC GACAACGCCA TCAACCTCAA GGTCGCGCTG GCCATGCTCG CCAAGCTGGG CTACGAGGCC GCCACGGCGG TCAACGGCAG CGAAGCCGTG GACCGGGTTG CCGCCTCGCT GCGCACCGGC CTTGGCGAGA CGCCGCGCCA GTACGCCGCC ATCCTGATGG ATGCCAACAT GCCGGTGATG GACGGCTTTG TCGTCTCGCG CCTGATCATC AGTACCCACG GCACGCAGGC GCCGCCTATC ATCGCGCTGA CCGCCTCGGT GCTGGAAGAA GACCGCCAGC GCTGCCTGCA GGCCGGCATG GTGGGCTTTT TGCCCAAGCC GCTGCGGATT GACGAATTGT CCGAGTCGCT GGCGCGTTAT GCCCGGCAGG CCGAGCCCGA AAATGCTACG AAAATAATAG CTGCAGACGC CGTGCCTGAT GCGCAAGATG CTCAATCGGG CATTAAACCG GAGCAGGTGC TGATCGACTG GAACCGGCTG GAGCAGTTTC GGGAGTTTGA CGACGACGAA CTCAGCATGA CGCGCGAGGT GGTGCTGCTC TTCATCACCG AGATGCCCCA GCGCATCGAC GACATCCGGG GCGCCTTGTC GGCCTGCGAC AGCGCCGCCT TGTCTCGCGC TGCCCATGCG CTCAAGGGCG CGGCGTCCAA TGTGGGCGCG CAAGCCTTGA GCGGTGCCTG CGCTGCCCTG GAGCAGTCGT GCCTGCAGGG CCAATGGCCT GCGGACGCGG CGCTGCAGGT TGCGGCGCTG GTGGCGTTTG CCGACCAGAC CTGCCAGGCG CTCAAGGGCT GGACGGCGGC GCAGGCGGCC TAG
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Protein sequence | MSSGARPLAM TFSLRTVLIT SLLLFSLLPA GVVGWFLYRS NLQSVELLSG KIIEDMTQRI KTDVQGHLAQ AHVVLNGLIH EQPDVSAVRR ARQLIESPAL FEQTAFAMTR MTPDVPRMYV GSARGEFLSV ETFAQDASTR VRVSERKEGG DGRGLFMAES PGDRRHGLPA EKGGYDPRSR PWYRAAMDNK GRAFTPISVL AADRQLRLTL AQPVYGADGG ALGVFAVDLP LKSLNQMLQS MRISARGAVF LVDEQGFMVA SSTGDELFSG GAGNLQRHKP LQSRNPIIRQ AYGEAAPSLG QTLESSVQRV SFLRRISMAD DTLMVALQPF GESMGVRWSL VVAAPESDFT AVAQAALKKT LAVTALILLL GALLAIALAW RLSRHFRRLG EAAALLALGE VPPVQPASRI AEVRQLSQTL HDSAGELQRH RAAIQAQTLA LHEANETLED RVASRTAELN ASRDEALGAA RAKAAFLAAM SHEIRTPLNG VVGMTTLLAD TPLDLEQRDY VHTMRISSDQ LLGVINDILD FSKIESGKLE LENEPLNLLA TIEEACDIGA PRAREKGLEL LVDLGDELPG WVRGDVTRLR QILLNLVNNA VKFTEKGQVV VSAHVLEDFS PGRGGLVEFR IKDSGIGIEP DRQAALFQSF VQVDASTTRK YGGTGLGLAI CQRLVRLMGG QIGLESAPGD GSTFWFTARL GHADAPEVAM LSALHLVSLA GKRVAVLDDT QLNLRILDKQ LRRWGMQPVL FERAAEALAW LAGNPVDVVI SDMHMPEMDG LSFARLLRER TPATPIVLLT SGTMPSGEQA RVFDARLLKP YRQSQLFESL ARVTSAPVEV QKVARSEPAA ARNQFILVAD DNAINLKVAL AMLAKLGYEA ATAVNGSEAV DRVAASLRTG LGETPRQYAA ILMDANMPVM DGFVVSRLII STHGTQAPPI IALTASVLEE DRQRCLQAGM VGFLPKPLRI DELSESLARY ARQAEPENAT KIIAADAVPD AQDAQSGIKP EQVLIDWNRL EQFREFDDDE LSMTREVVLL FITEMPQRID DIRGALSACD SAALSRAAHA LKGAASNVGA QALSGACAAL EQSCLQGQWP ADAALQVAAL VAFADQTCQA LKGWTAAQAA
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