| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0422 |
|---|
| Symbol | |
|---|
| ID | 4687280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 438226 |
|---|
| End bp | 439050 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639833419 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_980665 |
|---|
| Protein GI | 121603336 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATG CACAGCACCT GGACAGCTTG AGCGCCGAGC AGCTGCGCGC GCTGGCCGCA
GAACTCATCG CTCAGGTGGC CCAGCGCGAG CAGGCCATTG CCGCCAAGGA CGGCGAGCTC
AAATACCGCC AGGCCAAGAT TGACCAGCTC ACGCACGAGA TGGCGGTCCT CAAACGCTGG
AGGTTCGGGC GCAGCGGCGA GCGGCTGGAC CCGGCGCAGC TCAGCTTGCT CGATGAGACC
ATCGATGCGG ACATCGCCGC CATCGAAGTG GAGCTCGAGC AGCTGGCGCC CACGCCCCGC
GCAGCTGCCC AGACCGGCCC GCCTAAACGC GCCCGGCTGC CGCCCGGGCT GCCACGGGTG
GAGATTCACC ACGAACCGGA TTCAGACCTG TGCGCCACCC CAGGCTGCGG CTGCACGCTC
AAACGCATTG GGGAAGATGT CAGCGAAAAG CTCGACTACA CCCCTGGCGT GTTCACAGTC
GAGCGCCACG TGCGGGGCAA GTGGGCCTGC GCTAAATGCC AGAGCTTGAC CCAGGCGCCG
GTGCCCGCGC AGGTGATCGA CAAGGGGATT CCCACGGCCG GGCTGCTGGC GCAGGTGTTG
GTGGCCAAGT ACGCGGACCA CCTGCCGCTA TACAGGCAAG AAAGCATCTT TGGACGCGCC
GGCTTGGCCA TTGCCCGCTC CACGCTGGGC GCCTGGGTGG GCATGTGCGG CGTTCAGCTC
CAACCCCTGG TCGATGCCTT GAAGGCAGAA CTCCTCAGCC ATGCGGTGCT GCATGCTGAC
GAGACGCCGG TGCAGATGCT CAAACCCATC CCATTACACA CATAG
|
|---|
| Protein sequence | MVNAQHLDSL SAEQLRALAA ELIAQVAQRE QAIAAKDGEL KYRQAKIDQL THEMAVLKRW
RFGRSGERLD PAQLSLLDET IDADIAAIEV ELEQLAPTPR AAAQTGPPKR ARLPPGLPRV
EIHHEPDSDL CATPGCGCTL KRIGEDVSEK LDYTPGVFTV ERHVRGKWAC AKCQSLTQAP
VPAQVIDKGI PTAGLLAQVL VAKYADHLPL YRQESIFGRA GLAIARSTLG AWVGMCGVQL
QPLVDALKAE LLSHAVLHAD ETPVQMLKPI PLHT
|
|---|
| |