| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0397 |
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| Symbol | |
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| ID | 4687062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 394345 |
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| End bp | 396612 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639833390 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_980641 |
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| Protein GI | 121603312 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.243308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAAAGA TTCGCACCTA TCTTGTTCTG ATGGCAGTCG CCATCTTGCT GCCGGTGGTG
GTTTTTTCGA CCGTCGCGCT GCAGATGCTG CGCGACGGCG AGCGCGAAGC CGCCTTGCGT
GGCCTGCAGG AAACTGCCCG GGCAACCGCG CTGACCGTTG ACCGGGAACT GGCCAGTTCC
GTCACGGCGC TGGAACTGCT GGCGCGCTCG CCCCACCTTG AAAGCGGCGA CCTGCAAGCG
TTTTACAAAC AGGCCGCGCT GCTGAACAAG CGCCCGACAT CCTGGACCGT GTTGCTGGAC
AAAAACGCCC AGCAACTCGT CAACACGGCG CGTCCATTCG GCGAAGCGCT GCCACTCCCC
CGAGACCCCG GCAGGGTGCA GGAGGTCATG GAGACGCAGA ACTCACTGGC GTCTGACCTT
ACAGTGGGCC AGGTCACGCA AAAGCGGGTG ACCGTGATGT ATGTGCCCGT GCCGGCGCAT
GGCGGTACAC GCTATGTGCT GGCCCAGGTC TTCGCGATTG AATTCTTCAA CAACACGGTT
TTCCAGCCCA ACACGCCGAT CAACTGGGTC ATCGCGATCA TCGGCCGCGA TGGCCGATTC
ATTGCACGCA ACCTCAATGC TCAGGAACGG GTGGGCAAGC CCGCCAGCGC CGATCTGATG
AAAGCCGCAG GCGCCCAGGA CCATGGCCTG ATTCGCCACG ATACGCTGGA TGGCACCGAC
GCCTACAACG CCTTCACGCA TTCGGCCATT TCCGGCTGGA CGATTGGGGT GGCCGCTCCG
GTCAACAACA TTGAAGCCAC GGCGGGCCGC GCCGTGGCGA TTGCCACGCT CGGTTTATTG
ATAGCCATCA CCTGCGCCAT GATGATGGCG GCTTTTTTGG GGCGGCGACT GGTGCACTCC
ATTGCTGCCG CAACCGATGC CGCAGCCGCC ATGGGCCACG GCACCAAGCC CGAATTGACG
CGCTCCAATG TACTGGAGCT TGACCAGTTG CATACCGCCC TGATGCAGGC CGGCGTCATT
CTTGAACTCG CCCAAGCGTC AAGCGCGCAG GCTGAAGAAG AGCGTGAATG CCTGCTGCAA
GATGCCTACA AGGCACGCCT GCGCGCCGAA GCCGAAAGCA CCGCCAAGGA CCAGTTCCTG
GCCATGCTGG GGCACGAGCT GCGCAACCCG CTGGCCGCGA TTGGCGGGGC CATCGCCTTG
AGCGAGCGGC ACGGCCACGG GAGCGCTACC GCAGCCGAGG CGCGCGCGAT CATTCAGCGG
CAAAGCGGAC ATCTGGCTCA CCTGATCGAC GACCTGCTGG ACGTGAGCCG GATGGTGGGC
GGAAAAATCA CCCTGAAACC GCAGCCGGTT GATCTGGGGA AAAAGGCCCG TTCGTGCCTG
GAGTCACTGC GCGCAACCCG GCACATGACC GGCTATGAAC TGAAGGTCAC GACCGAGCCG
GTGTGGGTCA ACGCCGACCC GACGCGGCTC GAACAGATGC TCAACAACCT GCTGGTCAAC
GCCTTCAAGT TCACGCCGCC GGGCGGCCTG GTGGAGGTGA CGGTCAGCGC TTGCGCGCAA
GAGGCCGTGC TGAGCGTCAA GGACTCGGGC ATGGGAATTT CGCCCGAACT CCTGCCGCAT
GTCTTTGAGA TGTTTGTGCA GGGAAGCGCC AGCCTGGACC GCGCCCAAGG CGGCCTGGGC
ATCGGGCTGG CGCTGGTGCG CCAACTGGCC AGCCTGCATG GCGGAACGGT TTCGGCCGAC
AGCGCCGGAC CCGGCCAGGG CAGCACCTTC GTGGTTCGCC TGCCGCGCAT TGCCGCGCCC
GTTGCGCTGC CTGCCGCAGC GTTGCCGGCA AGCAGCCCGC ACCAGCGCTG GCGAATACTG
CTGATCGAGG ACAACGACGA TGCGCGCCAC ATGATGCGCC GCCTGCTGGA CATGGAAGGC
CATGAAGTTT TGGAGGCGGC CACCGGCACG GCAGGCCTGC GGCTGGCCAG CCAGCAAAAG
CCCGACCTGG CCATCGTCGA TATCGGCCTG CCGGAAATGA CGGGCTACGA GGTGGCCGAG
CACCTGCGCG GCGACGCCGA AACCCGAAGC ATGGGCCTGA TCGCCATGAC CGGCTACGGC
CAGCAGGAAG ACCGCAAGCA TGCCCTGGCG GCCGGGTTTG ACGTTCACCT GGTCAAGTCC
GTTGACATCG ACCACCTGCT GAAGGTGATT GACCAGTGCG GCCAGGCGGC CCTGCTGCGC
AAGCCGGGGA CCGGCACCGC CCCCATCGAG GGCGCGTCCC ACGGGTGA
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| Protein sequence | MLKIRTYLVL MAVAILLPVV VFSTVALQML RDGEREAALR GLQETARATA LTVDRELASS
VTALELLARS PHLESGDLQA FYKQAALLNK RPTSWTVLLD KNAQQLVNTA RPFGEALPLP
RDPGRVQEVM ETQNSLASDL TVGQVTQKRV TVMYVPVPAH GGTRYVLAQV FAIEFFNNTV
FQPNTPINWV IAIIGRDGRF IARNLNAQER VGKPASADLM KAAGAQDHGL IRHDTLDGTD
AYNAFTHSAI SGWTIGVAAP VNNIEATAGR AVAIATLGLL IAITCAMMMA AFLGRRLVHS
IAAATDAAAA MGHGTKPELT RSNVLELDQL HTALMQAGVI LELAQASSAQ AEEERECLLQ
DAYKARLRAE AESTAKDQFL AMLGHELRNP LAAIGGAIAL SERHGHGSAT AAEARAIIQR
QSGHLAHLID DLLDVSRMVG GKITLKPQPV DLGKKARSCL ESLRATRHMT GYELKVTTEP
VWVNADPTRL EQMLNNLLVN AFKFTPPGGL VEVTVSACAQ EAVLSVKDSG MGISPELLPH
VFEMFVQGSA SLDRAQGGLG IGLALVRQLA SLHGGTVSAD SAGPGQGSTF VVRLPRIAAP
VALPAAALPA SSPHQRWRIL LIEDNDDARH MMRRLLDMEG HEVLEAATGT AGLRLASQQK
PDLAIVDIGL PEMTGYEVAE HLRGDAETRS MGLIAMTGYG QQEDRKHALA AGFDVHLVKS
VDIDHLLKVI DQCGQAALLR KPGTGTAPIE GASHG
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