| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0380 |
|---|
| Symbol | |
|---|
| ID | 4689440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 377538 |
|---|
| End bp | 378107 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639833373 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_980624 |
|---|
| Protein GI | 121603295 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.792839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGGC AATCCACATC CCATTACGAC GCACTGAGCT TGGCGTTTCA TTGGCTCACG
GCCATCGTCG TGACCATCGC CTTCATCCTT GGGCCGGAAG GCTTCGGGCG GCTCATGCGC
CAAGGCATCG ACCCTGCGAC CCGAAGCGAC ATTGTCTGGC ACGAAACCCT GGGCCTGACG
GTGCTGGCGC TGACCGTGCT GCGCCTGCTG TGGCTGGCGT TGCGGCCTGC CGCACCGCAG
ATTCCTATGG CCGGCTGGAT GCACATCTCG GCCAAACTGA TGCACGCGGC GCTGTGGGCG
CTGTTGCTGG CCTTGCCGGT CACGGCGCTG CTGGCGCTGG GCAGCGAGTC CCATCCGCTG
ACGCTGCTGG GCGGCGTGCG CATCGACCAG ATGCCGCTGA TTGCCAACTC CGCCATCGCA
AAACTGGCCG ACTGGGGCGA GGTGCATCAA TTCCTGGGCG ACGCCATCAT GTGGCTGGCC
GGGCTGCACG CCGCCGCAGC GATTTACCAC CATGTCATTG TCAAGGATGG CGTTCTCTTG
AGCATGCTGC CCGCCAAGCG GCCGCGCTGA
|
|---|
| Protein sequence | MNRQSTSHYD ALSLAFHWLT AIVVTIAFIL GPEGFGRLMR QGIDPATRSD IVWHETLGLT
VLALTVLRLL WLALRPAAPQ IPMAGWMHIS AKLMHAALWA LLLALPVTAL LALGSESHPL
TLLGGVRIDQ MPLIANSAIA KLADWGEVHQ FLGDAIMWLA GLHAAAAIYH HVIVKDGVLL
SMLPAKRPR
|
|---|
| |