| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0376 |
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| Symbol | |
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| ID | 4689566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 373443 |
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| End bp | 375590 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639833369 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_980620 |
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| Protein GI | 121603291 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.64367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.593407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCC ACCGCATTCT TTCTGCTCTG TTTTTAATAG CTGCTTGCGC CCTTCCTGTA
TGCGCAAATG CCCAAAATGA CCTGATAAAA ACGTCACAGG CCCGCCCCGT GGTCACGACC
GAACAGGTGC GCGCCGAACT GCTGGCCTGG GCGCCCGAGG GCGTCGAGCC GGGCAAGCCG
GTCTGGCTGG GCCTGCAGCT GGCGCACCAG CCCGAATGGC ACACCTACTG GAAGAATTCC
GGCGATTCAG GCCTGCCGAC GATGCTCGAA TGGCAACTGC CGGCCGGCGT CACGGCGGGC
GAGATCGCCT GGCCGACGCC ACGCAAAATC CCCATCGGCA CGCTGGCCAA CTACGGCTAC
GAAGGCACGG TGCTGCTGCC GGTGCCGCTC ACCGTCGCGC CCGGCTTCAA TGCCGCGCAA
CTCGACGTGA AGCTCAAGGC CGCCTGGCTG GTCTGCCGCA AGGAATGCAT CCCGCAGGAG
GGCGAGTTCA CCTTAAGCCT GCCGGCCCGG GGCTCGACGG CGGCCAGCGG CGCCTTGTTC
CAGGCCGCTT TCGACGCCAC GCCAAAACCG CTGCCCACGG GCGGCAGCCA GATCGAAGTC
AGCGGCAAGG CGCTGAAAGT CTCGCTGGCC GGCCTGCCCG CCGCGCTGCA GGGAAAAACG
CTGGCGCTGT TCCCCGAAAC CGCCGGCATC ATCGAGCCGG CCGCGCCGTG GCGGCAGGAA
TGGCAGGGCG CGCTCTGGAC GGCTGAGCTG CCGCTGTCCG CCCAGCGCAC CGACAGCCCG
GCGCGCCTGC CGCTGGTCGT GGCCTTGGGC GATGCCGCCT GGCGCATCGA CGCACCCGTC
AGCGGCGACT GGCCTGCCGC CGCCAGCGTG GCCGTGGTGT CGCCGGCGCT GCAGGCAGCG
CTCAAGGCCA ATGCGGCCGC CCCGGCTGCG CCCATTCAGC CCGGCCAGCC GCCCCTTGGC
CTGCTGGCCG CGCTGCTCGG CGCGCTGCTG GGCGGGCTGA TCCTGAACCT GATGCCCTGC
GTGTTCCCGG TGCTGGCGAT CAAGGTGGTC GGCTTCGCGA GCCAGAAAAG CCAGGCCGCG
CGCCTGACCT CCGGGCTGGC CTACAGCGCT GGCGTACTCC TGTCGTTTCT GGCGCTGGGC
GCGCTGCTGC TGGGCCTGCG CGCGGCGGGC GACCAGCTCG GCTGGGGATT TCAGCTGCAA
AATCCGGCGG TGGTGGCGGC GCTGGCGGCG CTGTTCACGC TGCTGGGGCT GAACCTGGCC
GGGCTGTTCG ACTTTGGCGT CATCCTGCCC AGCCGCGTCG TCAACCTGCA GGCAAAAAAC
CCCAGCGTCA ATGCGTTTTT GTCGGGCGTG CTGGCCACGG CGATTGCCTC GCCCTGCACC
GCGCCCTTCA TGGGCGCGTC GCTCGGTTAT GCCGTCGGCC TGCCGGCGCT GCAGGCGCTG
GCGGTGTTCG GCGCCATCGG CATCGGCATG GCGCTGCCCT ACCTGGCGGC CAGCGCGCTG
CCGGCCGTGG CGCGCGCCCT GCCCCGGCCC GGCGCGTGGA TGGTGACGTT CAAGCAGCTG
ATGGCGTTTC CGATGTTTGC CACCGTCGCC TGGCTGGTCT GGGTGCTGGG CCAGCAAAGC
GGCATCGACG GCGCGGGCGC GCTGCTGGCG CTCCTGGTGC TGCTCGCGCT GGCTGTCTGG
TCCTTCAGCC TGCGCGGCAC GGCGCGCCGC GCCATCGCTA CGGTTTCAGT AGCGCTCTGC
GCTTTTGCGA TATGGGCTAT CGGCCCGAAC ATCATCAAGC CGGTGATCCC GCCAGCGGCC
GCAGCCTCGG CCCGCTGGCA GGACTGGCAG CCCGGCCGGG TCGAGCAGCT GGCGGCGCAG
GGCCAGAGCG TGTTTGTCGA TTTCACCGCC GCCTGGTGCG TGACCTGCCA GTACAACAAG
AAAACCACGC TGGCCAACGC CGACGTGCTG GCCGACATGG ACGCCAAAAA CGTCGCCCTG
CTGCGCGCCG ACTGGACGCG CCGCGACCCG GCCGTGACCA AGGCGCTGGC CGAACTCGGC
CGCAGCGGCG TGCCGGTTTA CGTGTTTTAC AAGCCCGGCC GCGCGCCGGT GGTATTGTCC
GAAATCTTGT CCGTGAGCGA TGTCAGGGCC GAACTGGCCA AGCTGTGA
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| Protein sequence | MNFHRILSAL FLIAACALPV CANAQNDLIK TSQARPVVTT EQVRAELLAW APEGVEPGKP
VWLGLQLAHQ PEWHTYWKNS GDSGLPTMLE WQLPAGVTAG EIAWPTPRKI PIGTLANYGY
EGTVLLPVPL TVAPGFNAAQ LDVKLKAAWL VCRKECIPQE GEFTLSLPAR GSTAASGALF
QAAFDATPKP LPTGGSQIEV SGKALKVSLA GLPAALQGKT LALFPETAGI IEPAAPWRQE
WQGALWTAEL PLSAQRTDSP ARLPLVVALG DAAWRIDAPV SGDWPAAASV AVVSPALQAA
LKANAAAPAA PIQPGQPPLG LLAALLGALL GGLILNLMPC VFPVLAIKVV GFASQKSQAA
RLTSGLAYSA GVLLSFLALG ALLLGLRAAG DQLGWGFQLQ NPAVVAALAA LFTLLGLNLA
GLFDFGVILP SRVVNLQAKN PSVNAFLSGV LATAIASPCT APFMGASLGY AVGLPALQAL
AVFGAIGIGM ALPYLAASAL PAVARALPRP GAWMVTFKQL MAFPMFATVA WLVWVLGQQS
GIDGAGALLA LLVLLALAVW SFSLRGTARR AIATVSVALC AFAIWAIGPN IIKPVIPPAA
AASARWQDWQ PGRVEQLAAQ GQSVFVDFTA AWCVTCQYNK KTTLANADVL ADMDAKNVAL
LRADWTRRDP AVTKALAELG RSGVPVYVFY KPGRAPVVLS EILSVSDVRA ELAKL
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