Gene Pnap_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0315 
Symbol 
ID4686587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp315758 
End bp316816 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID639833307 
Producthypothetical protein 
Protein accessionYP_980559 
Protein GI121603230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.392755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA GCCTGCGATT GACCGAAAAA TGGATGCAGC GCGGCCTGTG GCTGGTGGCG 
CTGGTGTTCG CCAGTTTCCT CATCGGCCTG GGCGGCACGC TGGTCGGCGA CCTGCCCAAG
GTGGAAAAGC AGCTCACGCT CGACGATTTC ATGGACCGCG CCGCCAGCAC CGCGCTGCGC
AGTAGCATCA AAACCACCGA AGCCGCCGAG CGCGATGCCG ATGCCGCGCT GGAGCAGGCC
CAGCTCAAGC GCCGCGTGAC GCAGGCCGAC TCCGCGGCGG CGCGTGAAAC CTTCAACAAC
TGGCTCTCGA CCCGCCACGC CACGCAGCTA TCCGGGCAAG ACCCCGAACT GGTGGCCAGA
ACCCGGGCGC TCGATGGCCT GAAAGACAAG GAGCGCGCCG CCGGCATGGC GGTCGAGGCC
CAGCAGCAGG CCGCGCTCGA TGCGCGGCAA AGCAGCGTTC GCGAGCGCCG CAAGCTGGCC
GAAATGGAGC AGGCGGCGCA AAAACTGCTG AATGCCGAAT ACCGCCGCAT CGAGCTGCGG
GTGTTTTTGT ACCGCCTGGC GCTGACCTTG CCGCTGCTGG TGGCGGCCGG CTGGCTGTTC
GCGAAAAAGC GCAAAAGCAC CTGGTGGCCG TTTGTCTGGG GCTTCATCTT GTTTGCGCTG
TTCGCCTTTT TCGTCGAGCT GGTGCCTTAT TTGCCGAGCT ACGGCGGCTA TGTGCGCTAC
ATCGTCGGCA TCGTGGTGAC GGTGCTGGTC GGCAGGCAGG CCATCCTGGC GCTGAACCGC
TACCTCGAAA AGCAAAAGCT CGTCGAGCAG CTGCCTGACG CTCAGCGCCG CGAGGAACTG
AGCTACGACA CCGCTCTGAC GCGGCTGTCC AAAGGCGTGT GCCCCGGCTG CGAGCGGCCG
GTGGATTTGA AAAACCCGGA GATCGACTTT TGCCCGCATT GCGGCATCGG CCTGTTCGAC
CATTGCCGGG CCTGCAACAC GCGCAAGGGT GCGTTTGCCA AGTTCTGCCA CGCCTGCGGG
GCAACCGGCC AGCGGGCGCA CTTGCCGGCC CAGGCCTGA
 
Protein sequence
MSKSLRLTEK WMQRGLWLVA LVFASFLIGL GGTLVGDLPK VEKQLTLDDF MDRAASTALR 
SSIKTTEAAE RDADAALEQA QLKRRVTQAD SAAARETFNN WLSTRHATQL SGQDPELVAR
TRALDGLKDK ERAAGMAVEA QQQAALDARQ SSVRERRKLA EMEQAAQKLL NAEYRRIELR
VFLYRLALTL PLLVAAGWLF AKKRKSTWWP FVWGFILFAL FAFFVELVPY LPSYGGYVRY
IVGIVVTVLV GRQAILALNR YLEKQKLVEQ LPDAQRREEL SYDTALTRLS KGVCPGCERP
VDLKNPEIDF CPHCGIGLFD HCRACNTRKG AFAKFCHACG ATGQRAHLPA QA