Gene Pnap_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0313 
Symbol 
ID4686168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp314236 
End bp314685 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID639833305 
ProductYiaAB two helix domain-containing protein 
Protein accessionYP_980557 
Protein GI121603228 
COG category[S] Function unknown 
COG ID[COG4298] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.638707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC AATATGTGAT GCAGCGCGAT ACCGGCGGCT GGCGCATTCA GGTCTGGACT 
TCGTTCACTC TGGCGGTGCT GGCCAGCGGC ACGGGCGTGA TGCAGCTGCC CAGCCAGGAG
CTGGACCGGG CCTTTCTGGC CATCGGGTTT TTCTTTTGCC TGTTCGCTGC CTTTGCGGCG
GCCAAGACCG TGCGCGACAA CCGCGACGGG CGGGTGGACA CCAACGGCTG GATCATCACG
GTGTGGGTTT CCTTTGCGGC GGCGGTGTGC CTCACGGCGT GGGGCTTGTG GCGCATGAAC
ATCGGGGACT GGCAAAAGGG CTACATGGTC GTGAGCTGGA TGTTTCTGAT CAGCAGCACG
TTCACGCTGG CCAAGACGAT CCGCGACCGT TACGAGGCCG ACCTGATGAC GCGCAGCAAC
GAGCCCGCGC CTGAAACGCG GCCCGCCTGA
 
Protein sequence
MTTQYVMQRD TGGWRIQVWT SFTLAVLASG TGVMQLPSQE LDRAFLAIGF FFCLFAAFAA 
AKTVRDNRDG RVDTNGWIIT VWVSFAAAVC LTAWGLWRMN IGDWQKGYMV VSWMFLISST
FTLAKTIRDR YEADLMTRSN EPAPETRPA