Gene Pnap_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0311 
Symbol 
ID4686078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp312085 
End bp312903 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID639833303 
Producthypothetical protein 
Protein accessionYP_980555 
Protein GI121603226 
COG category[S] Function unknown 
COG ID[COG4727] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.681533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC GCTTGAATCA TGGGCTGGGA ATGGCACTGC TGGCGGGCAG CCTGATTCTG 
CCCGTTGCCG CCCATGCCGG GCGTTCCTGC CAAGCGCGCC CGCCGACCAC GCAGTCGGTC
GAACTCGGCC TGGCGCTGGC CGAAAAAACG CTGGCCTCGC TCAACGCCAG CGGCGAGCGC
GTCGTGCTGC TGGCGCGCGC CGGGCAGGAT TTGAGCCGTT ACGGCCTGCG TTATTCGCAC
TTCGGGCTGG CCTGGCAGGT GGCTGACGGA CAGGGCGGCA ACACCTGGCA TGTGCTGCAC
AAGCTCAACG GCTGCGGCAC CGCCGAAGCG GCGCTTTACC GGCAGGGGCT GGGCGAGTTC
TTCCTCGATG ACCCGTGGCG CTTTGAAGCC GCCTGGCTGG CGCCCACGCC GCAGGTGCAG
GCGCGACTGC TGGCGCTGCT GCAGGACTCG CGTCGGGCCA TCAGCCTGAA CCACCGGCCC
TACAGCATCG TCAGCTACGC CTGGGGGCGC AAGTACCAGC AGTCCAACCA GTGGGCCATC
GAGACGCTGG CCGCCGCGCT GGAGCCGGGC GTGACCTCGC GCGAAAAGGC GCAGGCCTGG
CTGCAGTTCA GGGGCTATGA GCCGACGACC CTGCACCTTG GGCCGCTGAC CCGGCTGGGC
GGGCGGCTGA CGGCGGCCAA TATCGCCTTT GACGACCACC CGAATGACAA GCGCTTTGCC
GACCGCATCG AAACCGTCAC GGTCGATTCG GTGTTTGCCT GGCTGGCGCG TGCGCAGCTC
AGCCGGCCGG GCAAGGCGCC GACGCTGGTC GGGCCGTGA
 
Protein sequence
MNTRLNHGLG MALLAGSLIL PVAAHAGRSC QARPPTTQSV ELGLALAEKT LASLNASGER 
VVLLARAGQD LSRYGLRYSH FGLAWQVADG QGGNTWHVLH KLNGCGTAEA ALYRQGLGEF
FLDDPWRFEA AWLAPTPQVQ ARLLALLQDS RRAISLNHRP YSIVSYAWGR KYQQSNQWAI
ETLAAALEPG VTSREKAQAW LQFRGYEPTT LHLGPLTRLG GRLTAANIAF DDHPNDKRFA
DRIETVTVDS VFAWLARAQL SRPGKAPTLV GP