Gene Pnap_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0237 
Symbol 
ID4689374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp243374 
End bp243817 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID639833230 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_980483 
Protein GI121603154 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.697863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.333382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA TTCTCATCAT CGCCCATGCA CCGCTGGCCT CGGCTTTCCT CCAGTGCGTG 
CTGCATGTCT TTCCCGACCA TCCCGCCAGC GTGGCGGCGC TCGATGTCCA GCCCAGCATG
CCGCCCGAGG AAACGCTGGT CCAGGCAGGC ATTTTGCTCA AGCAACTCAA CACCCCGCAG
ACCCTGGTGC TGACCGATAT CTTTGGAGCG ACGCCCTGCA ATGTGGCGCA GCAACTGGCC
GACGGCGTGG CGACCAAGCT GGTCACCGGC ATGAATCTGC CCATGCTGCT GCGCGCGGTG
AGCTACCGCA ACGAGTCGCT CGATGTGCTG GTGGCGCGTG CGCTGGCGGG CGCCAGCCAG
GGCGTGATGC AGGTGGCCGT CACCGCACCC CAAAATCAAA TACGAAGAGA AAATGATCAA
GACCCGGACC ACCATCAGCA ATAA
 
Protein sequence
MNGILIIAHA PLASAFLQCV LHVFPDHPAS VAALDVQPSM PPEETLVQAG ILLKQLNTPQ 
TLVLTDIFGA TPCNVAQQLA DGVATKLVTG MNLPMLLRAV SYRNESLDVL VARALAGASQ
GVMQVAVTAP QNQIRRENDQ DPDHHQQ