Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0225 |
Symbol | |
ID | 4687309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 230702 |
End bp | 231652 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639833218 |
Product | hypothetical protein |
Protein accession | YP_980471 |
Protein GI | 121603142 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.630289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.31889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAATC TTTCGAAAAC TGCCATCGCG CTAGCGGTCA CGCTGGTGAC TGCTAGCGCA GCGCATGCCG CCGAGTTCAA CGCCAACCTC GAACTGGACA GCACTTACCT CAATAACAAC CGGGGGCTAT CGCAAAGCGG GCGGGTCGAA GTAAATGCCG TCGGTAAGGT CGGCAGCAAC TATTTCGTGG CGGGCCGCGC CAGCTTGCTG GCCAAAAAGG ACGGGGCCGC CGCGACCGAC GACATGTGGG TGCAACTCGG CTCCAGCACG GCGGACCTGA AATTGGGCCG CTTCGAAGCG GCAGACCTGT TCCGCCTTCC GCGCGATGTG CTCGTTCTCT ACGCCACCGG AGATGGCGTC TCCTCGGTGT ACCGGGCCAA TGTGCTGCGC GGGCGCGCAG GCTCCGAGGT GTTCCAGGCC GCCGGCACGG TGAACCTGGG CTCTGGCCTG TCGTTTGAAC TCGGAGCCAT CGAAACCCGG GCGACCGTCG GCACGTTGCC CGGGGCAGCC TACGTCGCCC CGAAAGGCCT GCGTCCAGTT TTGAGCTATG AACAAGGCCC TTGGTTATTG CGCGCGGGCC TGGAGTCCAT CAAGTACAAC GTCGGTGGCA AAACCCGTAC CGGCTTCGGC TTCACGGGCA GCTACAACTT CAGCGACTTC ACCTTGGTGG GCAACGCCGC AGCCAACAAG GATGCCAGTG GCAACAAGCA GACCAGCTAT GCACTCATTG GCGACACCAA GTTCGGTCTG GGTGGCGGCC TGATCTTCGG CAACACCAAG CTGCCGGCAG GGAGCTACAA GGTCACCACC GCCTATGCCG CGTACACCTT CCCCTTGTTC GACATCAAGG GCGCCACAGT GACTCCAGCC GTCTCGTTCT CAAAGGCCGG CGGCGTGAAC CGTTCCAACG ACGAGACCGG CGTCAGGGTC CGTTTCAACT ACAACTTCTG A
|
Protein sequence | MNNLSKTAIA LAVTLVTASA AHAAEFNANL ELDSTYLNNN RGLSQSGRVE VNAVGKVGSN YFVAGRASLL AKKDGAAATD DMWVQLGSST ADLKLGRFEA ADLFRLPRDV LVLYATGDGV SSVYRANVLR GRAGSEVFQA AGTVNLGSGL SFELGAIETR ATVGTLPGAA YVAPKGLRPV LSYEQGPWLL RAGLESIKYN VGGKTRTGFG FTGSYNFSDF TLVGNAAANK DASGNKQTSY ALIGDTKFGL GGGLIFGNTK LPAGSYKVTT AYAAYTFPLF DIKGATVTPA VSFSKAGGVN RSNDETGVRV RFNYNF
|
| |