Gene Pnap_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0169 
Symbol 
ID4689169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp180176 
End bp180847 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID639833162 
Producthypothetical protein 
Protein accessionYP_980415 
Protein GI121603086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.357305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTTGC CTTCCCCCAT CACCTTGGGC CTTGCCGGCC TGGCCTTGCT GTGCGGCGGC 
GCCGCCGTCG CCCAGGACAT CTATTCCTGT GTGGATGCAC GAGGCCGGAC CATCACTGCA
GATCGCCCGA TTCCCGAATG CAGCGACCGC ACGCAGCGCG AGCTGTCACG CAACGGCCTG
CTCAAGCGCC AGATCGGCCC TTCGCTCACG GCGCACGAGC AGGCCGCGCA GGATGAAAAG
GACAGGCAGG CCGCCGAGAT TCGCGCCCGC GAAGCCGAAG ACAAGCGCCG CGACCGGGCC
TTGCTGCTGC GTTACCCGAC ACGCGCCGTG CATGACCAAG AGCGCACTGC CGCACTGCTG
CAGATCGACG AAGTCATCAA GGCCTCCATC AAGCGCAGGG GCGAACTGGC CGATCAGCGC
AAGGCGATTG CCAGCGAACT GGAGTTTTAT GCCAAGGACC TGTCCAGGGC GCCCGCATCG
CTCAAGCGCA GGCTGGAAGA AAACGAGGGC AGCGTCGCGG TGCAGCAAAA GTTCATCGCC
GACCAGGAAC AGGAAAAAAA GCGCGTCAAC CTGCGCTTTG ACGAAGAACT GGCCAAGCTC
AAGCAGCTCT GGCCGATGGT GAGTCCGCCG ATCCGGCCCG GCGCCAGCGC CTCAAAAGTA
GGCAAGAACT GA
 
Protein sequence
MRLPSPITLG LAGLALLCGG AAVAQDIYSC VDARGRTITA DRPIPECSDR TQRELSRNGL 
LKRQIGPSLT AHEQAAQDEK DRQAAEIRAR EAEDKRRDRA LLLRYPTRAV HDQERTAALL
QIDEVIKASI KRRGELADQR KAIASELEFY AKDLSRAPAS LKRRLEENEG SVAVQQKFIA
DQEQEKKRVN LRFDEELAKL KQLWPMVSPP IRPGASASKV GKN