| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0125 |
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| Symbol | glcF |
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| ID | 4688391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 137627 |
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| End bp | 138874 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833118 |
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| Product | glycolate oxidase iron-sulfur subunit |
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| Protein accession | YP_980371 |
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| Protein GI | 121603042 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0581331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.40576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCC AACTCGCCCC CGAATTCCAG AACACGCCCG ATGGCCGCCA GGCCGAAGCC
ATTTTGCGCA AATGCGTGCA CTGCGGTTTC TGCACCGCCA CCTGCCCGAC CTACCAGCTG
CTCGGCGACG AGCTGGACGG CCCGCGCGGC CGCATCTACC TGATCAAGCA GGTGCTCGAA
GGCGAAACGC CGACGCGCAA GACCCAGTTG CACCTGGACC GCTGCCTGAC CTGCCGCAAC
TGCGAATCCA CCTGCCCCAG CGGCGTGCAG TACGGCCACC TGGTCGATAT CGGCCGCAAG
CTGGTCGATG AACGCGTGCC GCGCCCGGTG GGCGAGCGCG CCGTGCGCTG GGCGCTCAAG
GAAGGCCTGC CGTCGCCGCT GTTCGCCCCC GCCATGAAGA TCGGCCAGGC GGTGCGCGGC
CTGCTGCCCG AGTCGCTTAA GGCCAAGGTG CCGCCCAAAC AGCCGGCCGG CCAGTGGCCC
ACGCGCAGCC ATGCGCGCAA GATGCTGATG CTGGAGGGCT GCGTGCAGCC GGCCATGATG
CCCAACATCA ATTCGGCCAC CGCTCGCGTG CTGGACGCCG CCGGCATCGA GGTCGTGACG
GCGGCCAAGG CCGGCTGCTG CGGCGCGGTG AAGTTCCACC TGAACGACCA GGACGGCGGC
AAGCTGGAAA TGCGCCGCAA CATCGACGCC TGGTGGCCGT ATGTGGAGCA GGGCGTTGAA
GCGCTGGTGA TGAACGCCTC GGGCTGCGGC GTCACCGTCA AGGAATACGG CTACATCCTG
AAAGACGATG CGGCCTATGC CGAAAAAGCC GCCCGCATCA GCGCGCTGAC CCGCGACCTG
AGCGAGTTGC TGCCGGTTAT CGCCGAATCG CTGCAAGCCA GCCGGCCCGA CCTGGCCGGA
AAGATTGCCG CCGGCGCCCC CAGGCTGGCG TTTCACCCGC CGTGCACGCT GCAGCACGGC
CAGCAGCTGC GCGGCGGCGT CGAGCAGCAT CTGGGCGCAT TGGGTTTCGA CATCAAGGTC
TCCGGCAATG AGGCGCACCT GTGCTGCGGC TCGGCGGGCA CCTACTCGGT GCTGAACCCC
GAGATCGCCT ACCAGTTGCG CGACCGCAAG CTGGCCAACC TGGACGCCAT GGCGCCCGAG
GTGATTGTCT CTGCCAACAT CGGCTGCATT ACCCACCTGC AAAGCGGCAC CACGACACCG
GTGCGGCACT GGGTCGAGGT GCTCAATGAA GCGCTATTGA ATCAATAG
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| Protein sequence | MQTQLAPEFQ NTPDGRQAEA ILRKCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQVLE
GETPTRKTQL HLDRCLTCRN CESTCPSGVQ YGHLVDIGRK LVDERVPRPV GERAVRWALK
EGLPSPLFAP AMKIGQAVRG LLPESLKAKV PPKQPAGQWP TRSHARKMLM LEGCVQPAMM
PNINSATARV LDAAGIEVVT AAKAGCCGAV KFHLNDQDGG KLEMRRNIDA WWPYVEQGVE
ALVMNASGCG VTVKEYGYIL KDDAAYAEKA ARISALTRDL SELLPVIAES LQASRPDLAG
KIAAGAPRLA FHPPCTLQHG QQLRGGVEQH LGALGFDIKV SGNEAHLCCG SAGTYSVLNP
EIAYQLRDRK LANLDAMAPE VIVSANIGCI THLQSGTTTP VRHWVEVLNE ALLNQ
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