| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0086 |
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| Symbol | |
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| ID | 4686541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 88241 |
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| End bp | 88936 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639833079 |
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| Product | ABC transporter related |
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| Protein accession | YP_980332 |
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| Protein GI | 121603003 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0522946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTC CCCCCGCCCC CATCCTGCGC CTGACCGACA TCCACCGCAG CTACAACGTC
GGCACGGAAG TCGAGACCGA GGTGCTGCAC GGCATCAGCC TGAGCCTGCA GCCCGCCGAG
TTCGTCGCGC TCAAGGGGCC GTCGGGTTCG GGCAAGAGCA CGCTGCTCAA CATCATCGGA
CTGCTGGAGC GGCCCACGTC CGGCACGCTG GAAATCGCCG GCCAGCCCAC CGGGTCGCTC
GACGATGCGG GCCTGACGCA GTTGCGCGGC GCGACCATCG GCTTCGTGTT CCAGTTCCAC
CACTTGCTGC CGGCCTTCAC CGCGCTGGAA AACGTGCTGC TGCCATCCAT CATCGCCCAC
GGCACCGCCA CGCTTGACGC CGAAGCCAAC GCACGGGAAC TGTTGGCCCG TGTGGGCCTG
AAGGGCGCCG AATACAAGCG CCCCGGCGAA CTCTCGGGCG GCATGCAGCA GCGCGTGGCG
ATAGCGCGCG CGCTGTCGCT GCGCCCGCGC CTGATCCTGG CCGACGAGCC GACCGGCAAC
CTCGACACGG TGTCGGCCGA CGAGGTGTTC GGCCTGCTGC GTGAGTTCAA CCGCGACCAC
GGCAGCGCCT GCCTGATCGT CACCCACGAC CCGCGCCTGG CCGCGCGCTG CGACCGCATC
ATCGAGCTGG TGGATGGGCG GCTGGTGGCG GGTTGA
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| Protein sequence | MTTPPAPILR LTDIHRSYNV GTEVETEVLH GISLSLQPAE FVALKGPSGS GKSTLLNIIG
LLERPTSGTL EIAGQPTGSL DDAGLTQLRG ATIGFVFQFH HLLPAFTALE NVLLPSIIAH
GTATLDAEAN ARELLARVGL KGAEYKRPGE LSGGMQQRVA IARALSLRPR LILADEPTGN
LDTVSADEVF GLLREFNRDH GSACLIVTHD PRLAARCDRI IELVDGRLVA G
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