Gene Pnap_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0085 
Symbol 
ID4686832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp87914 
End bp88234 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID639833078 
Productputative transcriptional regulator 
Protein accessionYP_980331 
Protein GI121603002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA CTAGAAATTT CAAGGAAACC GTCATTCAGA GAGTGCAAAG CGATACGTCG 
TTTGCGCAGG CACTGCTGGA TGAGGCGGCC ACTTTGTTCC TTAACGGTGA GCCCGAGACC
GCCCGCCTCA TCTTGCGTGA TCTCGTCAAC GCCACCATCG GCTTTGAGCA ACTCGCAACG
CTCACCGCCA AACCGAGCAA GAGTCTGCAC CGGATGTTGT CCTCCACGGG CAATCCCAGC
ATGGACAACC TGGCCGCGAT TTTTCAGGCA GTGCGCCAAA GGCTGCAGGT CAGCCTTCAA
GCGCACTCGG TAGCAGTCTG A
 
Protein sequence
MALTRNFKET VIQRVQSDTS FAQALLDEAA TLFLNGEPET ARLILRDLVN ATIGFEQLAT 
LTAKPSKSLH RMLSSTGNPS MDNLAAIFQA VRQRLQVSLQ AHSVAV