Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0030 |
Symbol | |
ID | 4687106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 29057 |
End bp | 29905 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639833024 |
Product | two component transcriptional regulator |
Protein accession | YP_980277 |
Protein GI | 121602948 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.815374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.380288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCC GGCAGCTTTT TTTACGCCTT CGCCAACGCC CCGACACGCG GGCGGCGCGA CACGCAAGCG CTACCATAGC GGCCATGCTC AACAAGCCCC GCATCCTGGT CGTCGAAGAC GAATCCGGCA TCGCCGACAC GCTGCAATAT GTGCTGTCCA CCGATGGCTT CGCGCCGGTC TGGTGCAGCA CCGCCGGGCA GGCGCTGCGC GAATTTTCGG CCGGGTTGCC GGCGCTGGTC ATCCTCGATA TCGGCCTGCC CGACCTCAAC GGCTTCGAGC TGTTCAAGCG CCTGCAGGCC TTGCCCGGCG GCGCGCAGGT GCCGATGCTG TTTTTGACCG CGCGCAGCGA CGAGATCGAC CGCGTGGTGG GGCTGGAACT GGGCGCCGAC GACTACATCG CCAAACCCTT TTCGCCGCGC GAACTGGTGG CCAGAGTGCG CGGCATCCTG CGCCGCAGCG TGCGCCAGCC GCTGGCTGCG CCACTGCCCG AGCCGCCGCA ACCGGCGTCA GGCGCCACGC CCATGGCGGT CCGCATGGAA GCCGCCGCCA CGCCGTTCGC GCTCGATGAA GAGCGCCGCC AGATTCGCTT TTACGGCCGG GTGCTGGAGC TGTCGCGCTA CGAATACGGC ATCCTGCGGC TGCTGGTGCT CAGGCCCGGC CGCGTCTTCA CGCGCGACGA GCTGTTCGAC CAGGTGTGGA CGGATGGCAG CGGCAGCCTG GACCGCACGA TTGACGCGCA CATCAAGACC CTGCGCGCCA AGCTCAAGGC CGTGGCGCCG CACGCCGAGC CGATACGCAC CTCGCGCGGC TCGGGCTACG CGCTGAGCGA AGCGCTGCCA GCGGCGTGA
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Protein sequence | MTARQLFLRL RQRPDTRAAR HASATIAAML NKPRILVVED ESGIADTLQY VLSTDGFAPV WCSTAGQALR EFSAGLPALV ILDIGLPDLN GFELFKRLQA LPGGAQVPML FLTARSDEID RVVGLELGAD DYIAKPFSPR ELVARVRGIL RRSVRQPLAA PLPEPPQPAS GATPMAVRME AAATPFALDE ERRQIRFYGR VLELSRYEYG ILRLLVLRPG RVFTRDELFD QVWTDGSGSL DRTIDAHIKT LRAKLKAVAP HAEPIRTSRG SGYALSEALP AA
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