Gene Veis_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_5025 
Symbol 
ID4690258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008771 
Strand- 
Start bp11420 
End bp12085 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID639832966 
Producttype IV secretion system family protein 
Protein accessionYP_980122 
Protein GI121583600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0212937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGA AAGGTATTTT GAAGACAACC AGAGCGGCCA GTGGCGCTTT GGTTGTCGTC 
TTCGCTGGAG CTGCGCAAGC GCAGATTCCA GTGACTGACG TTGCCCACAT TTCGACCAGC 
ATTAAAAACC AGGTCGAAAG CATTGCCAAG TGGGGCCTGC AGTTCAGCCA ATTGCAGCAA 
CAAATTCAGC AGTATCAGCA ACAGTACGCG GCCATCACTG GCCCGCGTGG CATGGGTGCT 
TTGCTGGATA ACTCGTCGCT GAAAGCTGCA TTGCCCGCTG ACTGGCAACA GGTTCTCAGT 
GACGTAAAGA AGACCAGTGC CTACATCAAT GAGCGCAAGA AATACCCGAC ATTGAGCGCT 
TTGCCCAAAG CGAATGCACT GTATGACGTG ATTGCTTCGC AGAACGCAGT GATGGGCGAC 
TTATACGGCA AGGCCAATAA CCGATTGAGC CTTATTCAGT CCCTGAATGC GCAGATTGAT 
TCAGCCAACG ACCCGGCTGC TAAAGCCGAT TTGGCTAACC GCCTTATCAG CGAGCAAAAC 
GCTATTCAGG CTAACCAAAA TCTGGTGACC ATTCTTCAAC AAAAGCACCG TCAAGAGATT 
GAGGAAGCTG CATTACAGGC AACCAAGGAG AACACATGCA AAGAATTCAA GCGCTCAGGC 
TGCTGA
 
Protein sequence
MDLKGILKTT RAASGALVVV FAGAAQAQIP VTDVAHISTS IKNQVESIAK WGLQFSQLQQ 
QIQQYQQQYA AITGPRGMGA LLDNSSLKAA LPADWQQVLS DVKKTSAYIN ERKKYPTLSA 
LPKANALYDV IASQNAVMGD LYGKANNRLS LIQSLNAQID SANDPAAKAD LANRLISEQN 
AIQANQNLVT ILQQKHRQEI EEAALQATKE NTCKEFKRSG C