| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_pVir0053 |
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| Symbol | |
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| ID | 4682068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008770 |
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| Strand | + |
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| Start bp | 34862 |
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| End bp | 37330 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639832956 |
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| Product | VirB4 |
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| Protein accession | YP_980112 |
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| Protein GI | 121582710 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.111502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACGA GTATTTTTAC TTATTTAAAA GAACTTAAAA ATAAACCTAA AAAAGAAAAT
TTAGGAAAGA AAGAAAAGAA AAATTTCAAA GAATATATCA ATAAAATAAA TAGGGGTGCT
GACAATATTT TAATGTTAGC AGAACCAAAA ATTTTTACAA TGGCTAAAGA AAATAACATA
GCTTTTAAGC TTGATGAAAA TATTTTAGTT ACAAAAGATG GAAATTTATG TGTTGGAATT
GAGATCAAAG GAATTTCTTA TTCCGGAATT TCTTTAGAAG AAGAAATATC TTATCTTCAA
AGCCGAACAC AATTTTTTGG AAAAATTAGT TCTGATATAG AAATCAATTT GATTGTTAAA
AAAGATAGAA TTGAATTAGT AAAGCAAAAT TCTAACTCCA AAAATGTTTT TGCCAATCAA
ATTATAGAAA AATGGGAAAA TCATAAAGAC GCTTTCCAAA TAACTTACTT CCTAATCATA
TCAACTATTG ACAAAAAAAT AAGTGGAGCT TTGGAAAGTT TTAAGAACAA AACAACCAAA
GAAAAAGAGC AAAGTAAGGA AGAAAAAGAA AGTTTTAGTT TTGAAGCTAA AAAAATTATC
ATAAATGAAA CTTTGACTGA AGCAAAAAGA GCTTTGTCTA TATTTAATCC AACTCAAATC
ACGGCTGATG ATATTTTAAA TTTCTATGCA ACCTACTCAA ACGCACAAGA AACTAAATTT
AGATATACAA ACGAACTAAT CACTGATAGT TACATTAGCT CTAATGTAGA ATTTAAAAAA
GATTATATTT TATTTGAAAG AAATGATGGA AAACAAATGT TTTCAAGGTT TATAAGCATT
AAAGCTTATG AAACTGACAT AATATCTTCT CATATAACTA CAAAAATTCT AAGAAGCTCC
AGTGATTTTA TAATTTTTAT GAATATGCAA GCTTATGAAA AAGAAAAGGC GATAAAAAAG
GTAAAAGACA CAGGAGCATT TGCACCACAA ATCATAAAAG ATGAACTTAG CGGACTTATT
GAAATAATAA AAGCCGATAG AGAAAATTTA ATGCTTGTGA GCTTTTCAGT TTATATTTTG
GCTGAAAATT TAGAAGATTT AGAAACTAAA ACAAACGAGC TTAAAGGAAT TTTAGCAAAC
CAAAACCTAA ACATCGTTCG AGAAACCATA AATCAAAAGG CTTTATACTT CTCATTTTTT
CCAAGCAGAG CAAACTTAAA CGCTAGGAAA AGAACCCTAA AGGTTTCAAA TTTAGCTAGC
ATAGCCAATT TTGAAAAAGA TGTCTTAGGT TTTGCAAAAA ATGATTGGGG CGAACAGCCA
GTAACTATTT TTAGACATTT AAGTGGAACT CCTTATCTTT TTAATTTTCA TTGGACGGAT
CAAGGAGATA AGCCAAGCGG ACATACTATG ATTATAGGTG GAACAGGTGC AGGAAAAACA
ACATTAGCTC AATTTTTAAT GTGTAATCTT TATAAGTATG ATATTGATAT TTTTTCTATG
GATAAGCTTC GCGGTATGTA TAATTTCGCA ACTTATACAG ACGGAGAGTA TCACGACGCT
GATTTTAGTG ATTTTAAACT AAATCCGTTT GCATTGCCTT ATACAAGTGA AAATAAGTCT
TTTTTACAAA ACTTTATTCA AAAAATGGCT AATATAGAAG ACACTCAATA CAATGCCGTA
AATGAAATTT CAAAGACTAT AGAAAGGCTT TATAATAATA AACTTGAAGA AGATATCTTT
ACCTTAAGCG ATTTTATCGA CAGTCTTCAG TACGAAGAAA ATGATATTAA AGGACGACTA
AGACCTTTTC AAAATAGTAT TTTTGATAAT AAGCAAGATG CTTTAAGTTT CAACAAACAA
TTATCAATTC TAAATATGGA TAGCATTTTA AAAAATCCTA CACTAGCAAG CCTAACGGCT
TCTTACATAT TTCATAGGTT AAAAAATTCA GCAAAAAATT CAAAAAAAAG AGGCTTTTTT
TGTTTTATCG ATGAGCTTAA AGATTTTTTA ATGGACGAAA ATATGAGAGA AAGCATACTT
GAAAGTATTC TTGAAGTAAG AAAAATAGGT GGAGTAATGT GTATGGGTTT TCAAAACTTA
AGCTTTTTTG ATGATATTCC AAAGGGTGCA AGCTTTTTAG AAAATATAGC AAACTATATT
ATTTTTCCAA CAACGAACGC ACAAACGCTT GAAAATATGA GAAATAAGCT TAATTTAACA
CCGACAGAGC TTAAATTTTT GCAAGAAGCA GGAACAAATT CAAGGCAAGT TTTATTAAAA
ATGAACCTGT CAAATCAATC GGCTATTTTA AATATAGATC TTAGTCGTTT AGGAAAGCAT
TTAAGAGTAT TCTCATCATC AAGCGATAAT GTAATGCTTA TGAAGGAGCT TAAAGAACTT
TATCCAAACG ATTGGAGAAA TATGTATCTT GAAAATCAAA AACCAAATTT AAATCAAGGA
GCTAAATAA
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| Protein sequence | MGTSIFTYLK ELKNKPKKEN LGKKEKKNFK EYINKINRGA DNILMLAEPK IFTMAKENNI
AFKLDENILV TKDGNLCVGI EIKGISYSGI SLEEEISYLQ SRTQFFGKIS SDIEINLIVK
KDRIELVKQN SNSKNVFANQ IIEKWENHKD AFQITYFLII STIDKKISGA LESFKNKTTK
EKEQSKEEKE SFSFEAKKII INETLTEAKR ALSIFNPTQI TADDILNFYA TYSNAQETKF
RYTNELITDS YISSNVEFKK DYILFERNDG KQMFSRFISI KAYETDIISS HITTKILRSS
SDFIIFMNMQ AYEKEKAIKK VKDTGAFAPQ IIKDELSGLI EIIKADRENL MLVSFSVYIL
AENLEDLETK TNELKGILAN QNLNIVRETI NQKALYFSFF PSRANLNARK RTLKVSNLAS
IANFEKDVLG FAKNDWGEQP VTIFRHLSGT PYLFNFHWTD QGDKPSGHTM IIGGTGAGKT
TLAQFLMCNL YKYDIDIFSM DKLRGMYNFA TYTDGEYHDA DFSDFKLNPF ALPYTSENKS
FLQNFIQKMA NIEDTQYNAV NEISKTIERL YNNKLEEDIF TLSDFIDSLQ YEENDIKGRL
RPFQNSIFDN KQDALSFNKQ LSILNMDSIL KNPTLASLTA SYIFHRLKNS AKNSKKRGFF
CFIDELKDFL MDENMRESIL ESILEVRKIG GVMCMGFQNL SFFDDIPKGA SFLENIANYI
IFPTTNAQTL ENMRNKLNLT PTELKFLQEA GTNSRQVLLK MNLSNQSAIL NIDLSRLGKH
LRVFSSSSDN VMLMKELKEL YPNDWRNMYL ENQKPNLNQG AK
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