Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4279 |
Symbol | |
ID | 4670481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008766 |
Strand | + |
Start bp | 26769 |
End bp | 29168 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639826951 |
Product | transposase Tn3 family protein |
Protein accession | YP_974113 |
Protein GI | 121582584 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0330145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGTT GGCACACAAC GTTTTTGGGG ATGCGTGGGC TCCCCCGCGA TATCAGCGAC TTCGAGATGA AGGCATTTTT CACCTTCGAT GGTGCCGAGC GCGACGCAAT CAATGCACGC CGAGGTGATT CCCACAAGCT TGGTCTGGCG CTCCATATTG GTTTCCTGCG CATGAGTGGG CGTTTGCTCG GTGCCTTTCG GGTAATTCCA GTAGCCTTGT GGCGCCACCT TGGCAACGAG CTTGGCATTG CAGCACCAGA AGTCGCCTCG CTGAGAGCCA TGTATGAACG CGGGCGCACG CTATTCGATC ACCAACAAGT AGCCTGCACG GTCCTTGGAT TCCAGTGGAT GAGCGAGCAC CAGCGCCGCT CACTGGTACG TGAACTGCGC GACGAAGTGG CGCGCTGCGC CGACCGCGAT CAGCTACTCG TGCGGGCGCG TCAATGGCTG TACAAGAACA AGCTGGTGAT CGTGCACGAG CGGGCAATTC GGACACTGAT TGCGGCGGCA CTTGCCCAGC TTGAAGTTGA AACAGGCACC GCCATCGCCG CCAGCGTTGA TCCAGCAACA CTTGATCGCT GGCGAGCCTC AGTTTCAGAG CTGCGCCCAG ATGGACAAAC CCAGCAGAGT TGGCTATGGG CTGCACCGGC GAAACACTCA ACCCGCCAAA TCAGCGAGGT ACTGGAGCGC ATCGACCTGC TTTACACGCT GGACGTTCAT AAGCACCTGG CAGACATCCC CGATCTCATC TTGCGCCGCT ACGCGCGCCG ACTTGTCTCC AGGCCGCCCT CAGCCGGAGC CAAGATCAAA GAGCCAGCGC GCACCGTGGA GGTCGCATGC TTTCTTCGGT ATTGCCTGTT CACCACCACA GACCAGTTGA TCCTTATGGT GCAGCGCCGG ATCGCCGATC TGTGGCGTCA GGCTGCCGCC GATGTCCCCG CTACCGTCAA TTGGGCCGCA ATGTACAAAA CGCTGCTCGG CGAACTTGTT GCCTTGAGCG CGCAAGGTGC GGTGCCAGAT GCTGAGTTGC GTGCCCGTCT TGAAGCCTTG ATCACCGAAA CCCAGAAACG CAAACCACCG AGCAGGGCCT CCCTGGTCCG CGAGGGATTG ATTGATGGAA TTCGCCCCGT GCGGTCGTTG CTCGTCGCCA TTGCAAAGCT GCCCTGGCAG GCCACCGGCG AGCATCCTGC CATCGAGTAC CTTGCCAAGC TGCAAGCTTT ATATCTCAAA GGATCCAGAA AGCTGCCAGT TGAAGTGGTG GCACCAAGTC TGGGAATGAT CTGGCAGGTT TCGATCTCCA GCCCAGACCG GGAACGGGCG TTTCAGGCGT TGGAGGTGGC CACCCTGTTT GCCCTGCGCC GCGCGGTGCG CAATGGCTCG GTCTGGATTG AGCACAGCCT GAGCTTTCGG GGTCGTGCGC GCTTGTTCTT CACGGACGAG CGTTGGCAGG CAGAGTCCAA GAAACACTAT GCCCGTCTAT CGTTACCCAG CAAGGCTGCC ACTTTCTTGA AGCCTTTGCT GGCCAGAGTA ACTGCCGGTG TCGATGCGGT GGCCGCTGCA GCCCGCAGTG GCGTACTGCG CGTGGATGAT GAACTCCATT TGTCGCCATT GCCCGCAGAG GACGAAGACC CAGAAGTGAC CAAGCTGCGC GCGGCTTTGG ATCACCGCAT CGGTGAGGTT CAATTGCCGG AAGTGATTCT GGCCGTTGAC GCCCAGGTGC GCTTTAGCTG GATCATGCTC GGACGTGAGC CGCGCTCTAC CGACGAGCTG CTGATGGTCT ATGCCGGCAT CATGGCCCAC GGCACCAGTC TGACTGCGGT CGAATGCGCG CGCATGATTC CGCAATTGTC TGCCACCAGC ATTCGCCAGG CCAAGCTGGT GCCCCCGCCG CGCACGCACC GCCACCGCTA CTTTGGCGTG CTGGCACCGA ACTCACCCTT GAGGCCTGCC GTCACGGCGC TGGCGCGTGA TGCAGCGGTG AAACCGGCGC AGGTGCAAGC CGAGCCAGCC AGCACGGCTG CAGGCGAGGG CGCACTTGGG GTAAGAAGCC CACTGCCAAC CCAGACCGAG CCCGCCCAGC CGGTGCCACC CAAGCGCCCG GCGCACTATT TGTGGGCGGT GCTGATGGCC CGTATCTACG AGGTGTTCCC GCTGCTGTGC CCCATCTGCG GCGGGCAAAT GCACATCATC GCCTTCATCA CACACAGTGC CGATATCCGC CAAATACTGG AGCACATCGG GGTGGAGACG GAGCCGCCGC ACATCACCCC GGCACGCGGG CCGCCACTGT GGGACGAGTG CGACGCGCAA GCCGCAGAGG GCGTGGAGCC AGCCCCAGAC TGGGATGAAG CGACCCAACC GGCCCCGGAC TTCGAGGTCG ATCAGCGCGT CAGTTGGTAG
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Protein sequence | MQGWHTTFLG MRGLPRDISD FEMKAFFTFD GAERDAINAR RGDSHKLGLA LHIGFLRMSG RLLGAFRVIP VALWRHLGNE LGIAAPEVAS LRAMYERGRT LFDHQQVACT VLGFQWMSEH QRRSLVRELR DEVARCADRD QLLVRARQWL YKNKLVIVHE RAIRTLIAAA LAQLEVETGT AIAASVDPAT LDRWRASVSE LRPDGQTQQS WLWAAPAKHS TRQISEVLER IDLLYTLDVH KHLADIPDLI LRRYARRLVS RPPSAGAKIK EPARTVEVAC FLRYCLFTTT DQLILMVQRR IADLWRQAAA DVPATVNWAA MYKTLLGELV ALSAQGAVPD AELRARLEAL ITETQKRKPP SRASLVREGL IDGIRPVRSL LVAIAKLPWQ ATGEHPAIEY LAKLQALYLK GSRKLPVEVV APSLGMIWQV SISSPDRERA FQALEVATLF ALRRAVRNGS VWIEHSLSFR GRARLFFTDE RWQAESKKHY ARLSLPSKAA TFLKPLLARV TAGVDAVAAA ARSGVLRVDD ELHLSPLPAE DEDPEVTKLR AALDHRIGEV QLPEVILAVD AQVRFSWIML GREPRSTDEL LMVYAGIMAH GTSLTAVECA RMIPQLSATS IRQAKLVPPP RTHRHRYFGV LAPNSPLRPA VTALARDAAV KPAQVQAEPA STAAGEGALG VRSPLPTQTE PAQPVPPKRP AHYLWAVLMA RIYEVFPLLC PICGGQMHII AFITHSADIR QILEHIGVET EPPHITPARG PPLWDECDAQ AAEGVEPAPD WDEATQPAPD FEVDQRVSW
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