| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4266 |
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| Symbol | |
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| ID | 4670475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 15120 |
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| End bp | 15884 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826938 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_974100 |
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| Protein GI | 121582571 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.44227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00186593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCAGA AGTTTTTAGC CGCTAAATTG GCCCTCGTCG TCGCTGTTTC GAGCACGTTG
ATGGTCACGC CTGTGGAGGC TGGTATCCCC GTCATCGACG GCACCAACCT GTCGCAGAAC
ATCATGACGG CTATCGAATC GGTGGCCCAA ACGCTCAAGC AAATTGAGCA GTACAGCACC
CAGCTCCAGC AGTATCAAAA CCAGCTCCAG AACACGATGG CCCCGGCCGC GTATATCTGG
GATCAGGCGC AATCGACCAT CAACGGGTTG ATGAATGCGA CCAACACGCT GAACTACTAC
AAGAACCAGC TCGGCAGCCT GGACAGCTAC ATCGGCAAGT TCCAGGACGT GAACTACTAC
AAGGGGTCGC CGTGCTTCTC GGCTACCGGC TGCTCGGCCG CCGAGTGGAC GGCCATGAAG
AACGTGCAGC AGCTCGCCAG CGAGTCGCAG AAGAAGGCCA ACGATGCCTT GTTCAAGGGC
CTCGACAAGC AGCAAGACAA CCTGACCGCC GACGCGGCGA CGTTGCAGCG GCTCCAGTCC
TCGGCGCAGG GCGCAACCGG GCAGATGCAG GCCATCGGCT ACGCCAACCA GCTCGCCAGC
CAGCAGGCCA ACCAGCTCTT GCAGATTCGC GGCCTGTTGA TCGCGCAGCA GAACGCGGTG
GCAACCAAGA TGCAGGCCGA CGCCGACAAG GAAGCCCAGC AGGCGGCAGC GGCCGCACAA
CTGCGCCAGG GCAGCTACCG GGCCAGCCCG GCGCGCACCT GGTAA
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| Protein sequence | MKQKFLAAKL ALVVAVSSTL MVTPVEAGIP VIDGTNLSQN IMTAIESVAQ TLKQIEQYST
QLQQYQNQLQ NTMAPAAYIW DQAQSTINGL MNATNTLNYY KNQLGSLDSY IGKFQDVNYY
KGSPCFSATG CSAAEWTAMK NVQQLASESQ KKANDALFKG LDKQQDNLTA DAATLQRLQS
SAQGATGQMQ AIGYANQLAS QQANQLLQIR GLLIAQQNAV ATKMQADADK EAQQAAAAAQ
LRQGSYRASP ARTW
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