| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4260 |
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| Symbol | |
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| ID | 4670488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 10896 |
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| End bp | 11594 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639826932 |
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| Product | conjugal transfer protein TrbP |
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| Protein accession | YP_974094 |
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| Protein GI | 121582565 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 76 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00457278 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCTC TGCGGGTTCC TGATGGAACC GTCGAAGCGT TGAAGTGGCT CGCCCTGGCC
TTGATGACCG GCGATCACGT CAACAAGTAC CTGTTTAACG CGACGCTGCC GGTGCTGTTC
GAGGCCGGCC GCGTGGCGCT CCCTCTTTTC GTGTTCGTCC TGGCCTACAA CCTGGCCCGG
CCGGGCACGC TCGAACGCGG CGTTTACGGC CGCACCATGT CACGCCTGGC GGTGTTCGGC
GCGCTGGCCT CGGTGCCCTT CGTGGCCCTC GGCGGCCTGT ACGCCGGTTG GTGGCCGCTC
AACGTGATGT TCACGCTGCT GGTCGTCACG GCAACGGCCT ACCTGGTCGA ACGTGGCGGC
AAGCTGCACC TGGCGGCCGC CGGCGTGGTG TTCCTGGTCG GCGGCAGCTC GGTCGAATAT
TGGTGGCCGG CCGTGGCCTT CGGCCTGGCG GTGTGGTCGT ACACGCGGCG GCCGAGCTGG
GCGGCCGCGG CGGTCGCGGT GCTGGCCTGC GCGGCCCTGT GGTTCATCAA TCGCAACCTG
TGGGCCTTGG CGGCCCTGCC GGTGCTCTTC CTGGCCTCGC GTGTGGACGT GCGCCTGCCG
CGCCTGCGCT GGGCCTTCTA CGCCTATTAC CCGCTGCACC TGGCCGCGCT CTGGTTGATC
CGCATCCCCA TGAGCAAGGC CGGCTACCTG TTCTTCTGA
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| Protein sequence | MKALRVPDGT VEALKWLALA LMTGDHVNKY LFNATLPVLF EAGRVALPLF VFVLAYNLAR
PGTLERGVYG RTMSRLAVFG ALASVPFVAL GGLYAGWWPL NVMFTLLVVT ATAYLVERGG
KLHLAAAGVV FLVGGSSVEY WWPAVAFGLA VWSYTRRPSW AAAAVAVLAC AALWFINRNL
WALAALPVLF LASRVDVRLP RLRWAFYAYY PLHLAALWLI RIPMSKAGYL FF
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