| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4961 |
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| Symbol | |
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| ID | 4685701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | - |
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| Start bp | 155436 |
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| End bp | 158180 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639826601 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_973764 |
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| Protein GI | 121583328 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.287732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA GCTGGGGTCC CTCGGGACCA GGAAAACTAT TCACGAACTC CCCGGCTTGG
AATCTGACGT TAGACGGCGA GCAGTTTGCT CTTGAGGTCA GGGGTAAGGC TCAGACAGGC
AGCGTTCTGC TCTTGGAGTC ACTGGCGATT GAGCCGGGAA CATTCTGGAC TGCACTTCAT
TTCCCGTCTA AAAATGGCAA GCGCCAAAGC CTTGATGGAA TTCCAAACGA AGAGGCTGCA
TCGCTAAGGC AGACCCTCTT CTCAACTATC GAGCAGATAA GACACCGCGA GCGGGTTCAA
GCGTTACTGA AGGACTTCAA CACAGTTACC GCGCCTGTAT TGACCTGGGC GAAGCAAGCT
GTTCAGGCTG CCAAAGACCA ACTGCAGAAA AAGGGCTGGC TCACCCATGA ATTTGTCCAG
CGGCAAAATG AAGGCAAACC CACAGGGCTG AGCAAATACC TCTCGACGCC CGAAGTCGCG
AATCATGTAG AAAAGCAGTC GGCGCAGTTT CACGCAGACC TCAAATTCTG GAAACACGAC
TTTTCGATAT TTGCCAAGGG CGTTAATGAA AGACATCTAG CCAAGGAACT CATCGGCTCG
AAGGAGTTTT TTGACAGCGT AGAGAAGTCC CCGCTCACGG ATGAACAAGC CAAAGCGGTT
GTGTGTTTCG ACAACCGGGT CTTGCTCGTG GCTTCGGCGG GCTCCGGGAA AACATCGACC
ATGGTGGCCA AGGCAGGCTA CGCGCTCAAG ATGGGCTACT GTGAAGCCGA CCGAATGCTG
CTATTGGCGT TCAACAATGA TGCAGCCGCA GAGCTCAGGC AGCGGATTCA AGACAGACTC
GGCCCTTTGG GGCTGCCGGC GGACAAAGTT GTCGCCAAAA CCTTCCACGC GTTTGGACTG
GACGTCATTG GCTTGGCTAC GGGCAAGCGC CCTTCCCTAG CACCCTGGGT TGAGAACGGC
AAAGACCTGG AGCAGCTGAT GGCCATCGTC GACGACCTCA AGGACCGGGA CACCGGCTTT
CGAATCAGCT GGGACCTTTT CCGAGTTGTG CTGGGCCAGG ACCTGCCAAA GTTTGGCAAA
GAAGCACAAG CACCTGATTC TTGGGACAGA AACTCCAAAA AGGAAGGCTT TAGGACCCTT
AATAATGAGG TTGTGAAAAG CCGTGGTGAG CAGTTGATTG CCAACTGGTT TTTCTACAAC
GGCGTTCGGT ATGTCTACGA AGGAGCGTAT GAGGTCGATA CGGCCGATGC GCATCATCGG
CAATACTACC CAGACTTCTA CTTGCCCGAT GCCAAAGCGT ATTTGGAGCA CTGGGCACTG
GATGCCAATG GCCAAGCGCC GCCAGACTTC GTTGGTTATC AGGAAGGTAT GGAATGGAAG
AAGCAGGTCC ATGCTGCCAA CGGTACCAAG CTGCTGGAGA CCACGGTCGC GCAACTCTGG
TCAGGCAAGG CTTTCGAGTA TCTGCAGACT CAGCTTCAAC AGCTTGGTGT GACGCTCGAG
CCCAATCCAG ACAGGCCTGT TCCGGGCAGA AAAGCAATAG AAAATCCGCG ACTTGCAAAA
ACCTTCCGCT CTTTCATAAC ACATGCCAAA AGCAATCGGC TCGACCTGGG AGACCTCAAG
AAGCGATTGG AATCAGGCGT CGCAGGAGAT TTCAAGTTCA GGCACACGAT GTTTCTGGGC
CTGCTTGAGA AGATTTGGAC CCAATGGGAA GCTCAGCTCA CAAAGGACAA ATGCATTGAC
TTTGATGACA TGCTCAATCT CGCCACAGAC TGTGTCGAGC AGGGGAAATG GAAGAGCCCC
TACGAGCTTG TAATGGTCGA TGAGTTTCAG GATGCGAGCC AAGCACGGGC TCGACTGGTT
GCAGGTTTGG TGAGCGGTCC CGACAAATGT TTGTTTGCTG TGGGTGATGA CTGGCAGAGC
ATCAACCGCT TCGCGGGGGC TGACCTGGCA GTCATGACTG ATTTCGAACG CCGGTATGGC
AGTGCGGTCA CGCTCAAGCT GGAAACCACC TTTCGTTGCC CGCAATCGCT GTGCGACATC
AGCAGTGCAT TTGTTCAGAA GAACCCGAAG CAGTTGCGCA AAGCCGTTCG CTCTTCCAAG
CCTAACCTCG CTGAACCAGT ACTCATCATT CGGGTTGACG ACGAAAGACA GATTCGAGCT
GCAGTGCAAA TGCGCCTTGG GGAGATTTCG CGGGAAAACG CCACAGTTGG ACGAAAGCCC
AAGGTTTTAA TGCTGGGTAG ATACCAAAAA GACAAGGCTT ATTTGCCTTA CGCAAACGAT
GCGCTTGAGC TGGACTTCAT TACTGTTCAC TCATCCAAGG GCCTTGAAGC TGACCACATC
ATTTTGCCGA GAATGACCTC CGAGACAATG GGCTTTCCAA GTCAAATAGC TGATGACCCC
GTGCTTTTAC TGGCAATGCC AGGGGGAGAT GCGTTCGAAA ACGCCGAGGA GCGGCGGCTC
TTTTATGTCG CGCTGACCAG AGCGCGGGCC ACGGTCACCC TCATCACCAT CACACTCAAA
GAGTCTGCGT TTGTGAAGGA GCTGGTGAGG GAGCATCAGA TTACCGTGCG CATGGCCGAC
GGCACCGAGA GCTCAAACGA GCTGTGCTCA GTATGCGGCG ACGGTTTTGT GGTTCCAAAG
AACGGAAAAT ACGGCGCTTT CCTTGGTTGC AGCAATTATC CGAGATGCAG GCACACCCGG
AATATTGAGC AGAATGAAGT CAGAAATCAC AGCAGGAAAC ATTAG
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| Protein sequence | MAQSWGPSGP GKLFTNSPAW NLTLDGEQFA LEVRGKAQTG SVLLLESLAI EPGTFWTALH
FPSKNGKRQS LDGIPNEEAA SLRQTLFSTI EQIRHRERVQ ALLKDFNTVT APVLTWAKQA
VQAAKDQLQK KGWLTHEFVQ RQNEGKPTGL SKYLSTPEVA NHVEKQSAQF HADLKFWKHD
FSIFAKGVNE RHLAKELIGS KEFFDSVEKS PLTDEQAKAV VCFDNRVLLV ASAGSGKTST
MVAKAGYALK MGYCEADRML LLAFNNDAAA ELRQRIQDRL GPLGLPADKV VAKTFHAFGL
DVIGLATGKR PSLAPWVENG KDLEQLMAIV DDLKDRDTGF RISWDLFRVV LGQDLPKFGK
EAQAPDSWDR NSKKEGFRTL NNEVVKSRGE QLIANWFFYN GVRYVYEGAY EVDTADAHHR
QYYPDFYLPD AKAYLEHWAL DANGQAPPDF VGYQEGMEWK KQVHAANGTK LLETTVAQLW
SGKAFEYLQT QLQQLGVTLE PNPDRPVPGR KAIENPRLAK TFRSFITHAK SNRLDLGDLK
KRLESGVAGD FKFRHTMFLG LLEKIWTQWE AQLTKDKCID FDDMLNLATD CVEQGKWKSP
YELVMVDEFQ DASQARARLV AGLVSGPDKC LFAVGDDWQS INRFAGADLA VMTDFERRYG
SAVTLKLETT FRCPQSLCDI SSAFVQKNPK QLRKAVRSSK PNLAEPVLII RVDDERQIRA
AVQMRLGEIS RENATVGRKP KVLMLGRYQK DKAYLPYAND ALELDFITVH SSKGLEADHI
ILPRMTSETM GFPSQIADDP VLLLAMPGGD AFENAEERRL FYVALTRARA TVTLITITLK
ESAFVKELVR EHQITVRMAD GTESSNELCS VCGDGFVVPK NGKYGAFLGC SNYPRCRHTR
NIEQNEVRNH SRKH
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