Gene Pnap_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4948 
Symbol 
ID4685796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp145208 
End bp145828 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID639826589 
Productthiopurine S-methyltransferase 
Protein accessionYP_973752 
Protein GI121583316 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.527262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.560333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAC CCACCACCGA TTTCTGGCAA GCACGTTTTG ACAACAAGGA AACCGGCTGG 
GACCGCGGTG CGCCCGGTCC ACAGCTGCTG GCATGGCTGG AAAGTGGCGC ATTGCAGCCA
TGCCGGATTG CCGTTCCCGG CTGCGGCAGC GGCTGGGAGG TGGCCGAGCT GGCCAGGCGA
GGGTTCGAGG TGGTCGGCAT CGACTACACC CCGGCGGCGG TCGAGCGAAC CCGGGCCCTG
TTGGCGGCCC AGGGCCTGGC TGCTGAGGTC GTGCAGGCAG ATGTCCTGGC GTATCAGCCG
CACAAGCCGT TTGAGGCCAT CTACGAGCAG ACCTGCCTGT GCGCGCTGCA TCCGGACCAT
TGGGTGGCGT ACGCCAGGCA GCTTCAACAG TGGCTAAAAC CCCAAGGCAG TATTTGGGCA
TTGTTCATGC AGATGGTTCG ACCAGAAGCG ACCGACGAGG GGCTTATTCA GGGACCGCCT
TACCACTGCG ATATCAACGC CATGCGGGCG CTCTTTCCCG CGCAACACTG GGCGTGGCCC
AGGCCGCCCT ATGCAAAAGT GCCCCATCCC AACGTCGGCC ATGAGCTCGG CCTTCGTTTG
ATGCTTCGCC AGGGAAGATG A
 
Protein sequence
MAGPTTDFWQ ARFDNKETGW DRGAPGPQLL AWLESGALQP CRIAVPGCGS GWEVAELARR 
GFEVVGIDYT PAAVERTRAL LAAQGLAAEV VQADVLAYQP HKPFEAIYEQ TCLCALHPDH
WVAYARQLQQ WLKPQGSIWA LFMQMVRPEA TDEGLIQGPP YHCDINAMRA LFPAQHWAWP
RPPYAKVPHP NVGHELGLRL MLRQGR