| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4939 |
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| Symbol | |
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| ID | 4685680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 136855 |
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| End bp | 137772 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639826579 |
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| Product | phage integrase family protein |
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| Protein accession | YP_973743 |
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| Protein GI | 121583307 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.267668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.379493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCGTTG AAAATACACT CGTCCTTTTT GCTTATGACG CCCAGGATTG GGTGACGCAA
CCCGGCATGG CGTTTGATGC ATTTTTGGCA GGCTATCGCT TTGAGGGGCG GCATCTTCGC
GCCAGTTCTT TTGTTGTTTA CAGAGGCATG TTTATGCGGT TGCATGACTG GCTTGGACAG
CAAGACAAGA ATCTTTTCTC TCTCAATGCA AGACTCATCA ACGAGTTTTT AGACAGTAGA
ACCCTTTCTG CGGAAAGTCG GCACCGCTAT CTGCTCCTCT ACACGACGCT GTTAGCGCAC
TTGGCGGACT TCAAGGCGGC TCAAGCCAAC CCGGCCCACG CGCTCCTGCT GGAGCAAGAA
GCACCCGAAA GGGGAAATCC GGAATGGCTC ACTGCGGCTG AGGCCCAGGC GTTTTTGACT
ACTGCCGCAC CGGGGTCTGG CTGGAAGCAG TTGAGGAACC GCGCACTGGC GCACACCGTG
CTCGGGGCAG CCTTACATTC TTCAGAAGTG CTAAGCCTCA AACTTTCGGA CTTGAACCGA
AAACGAGACG TGGTGGAAAC AATTTGGATT CGACCGAATG GCCCTCGGCC TTCACGGGTG
GTCCCTGTGC AGAGGTTTGC ATTGACGGCA ATAGAGGCTT GGCTGGCAGA AAGAAGCGTG
CGAGGCCTGC CTGGAGCGCT GGTTTTTCCC GCCAGCCCGG CTGGCGGGCC GATTTCACCA
GCGACGTTGT TCAGGCAGGT GAGAGCAACG CTTGTAAAAG CCGGCATCTC CCGGCGCTAC
GAAGGACCTA CCTTGCTGAG AAACACTTGC GGTGCGCTTT GGCTGTCCAC CCATCCAGCG
CCCCAAGTCA TGCAGTGGAT GGGGCATGCG ACGCTGCGCA CAACGGAGCT TTTGTTAGGA
AAAAGTGAAA ACCGATAG
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| Protein sequence | MTVENTLVLF AYDAQDWVTQ PGMAFDAFLA GYRFEGRHLR ASSFVVYRGM FMRLHDWLGQ
QDKNLFSLNA RLINEFLDSR TLSAESRHRY LLLYTTLLAH LADFKAAQAN PAHALLLEQE
APERGNPEWL TAAEAQAFLT TAAPGSGWKQ LRNRALAHTV LGAALHSSEV LSLKLSDLNR
KRDVVETIWI RPNGPRPSRV VPVQRFALTA IEAWLAERSV RGLPGALVFP ASPAGGPISP
ATLFRQVRAT LVKAGISRRY EGPTLLRNTC GALWLSTHPA PQVMQWMGHA TLRTTELLLG
KSENR
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