| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4913 |
|---|
| Symbol | |
|---|
| ID | 4685755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008759 |
|---|
| Strand | + |
|---|
| Start bp | 98257 |
|---|
| End bp | 100521 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639826555 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973719 |
|---|
| Protein GI | 121583283 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.717395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATT CACACAAGGC CAAGACTGCG GCGGGCGCGG AGATTCAGCC GCCCAAGGCA
CCTCCGATGA CCCGGTCTCG AAGCCAGGTT GCCACGGCCT ATGCGCCCGG TGCTCTTTTC
ACCTTCGAGG GCGGCTTAGG CGCCTGCTTG GCCATCCCGG ACCAGCAAGA GCGGCAAACG
CCTGCGGATA TCTCCAAGGA GACGGCCGAG CAGATTCATC TGCGGGTGCG TGAGGTCTGG
CAGAACTGGT TCAACCGGGC CAGCACTGGA GGCACCGACA AGCACGCTGC ATTGCCCGGG
CAGTGCCTTG ACCTCATGCT GCTGCGCGAA GGCCGGTACC ACGCCCCGTC CCCGTCCCGC
TTCGAGCTGG TGGACCCGCT GCAGATGGGC TACGTTCCCG CGCCGCTGGC CTTTGTCTGC
AACGTTTGCC AGCGATTCAG GAGTTTTACT TCGGTCAAGG CCGCGGCTGA CGGGCTCTCT
GGCCTGGCGG GCGAGCCCTG CGGTGCAACG GGCCCCGAGC ACACGGGAAA GTGCCGCTGG
CGCCAGCTGG ACGTGGTGTT CATCCACTGG TCTGGAGCTT GGGAGCCGCC GAGCCCCGGC
AGGTGGGAAT GGCGTGCCAG CACGGAAAAG CGTCCCGGTC AACTCCACGA ACCGATGGGC
CGATGCTGGT GTGGCAGCGA AAAATTTTAT CTGCGGGACA ACTCGCCACG CATCGGCCAG
TGGTTCTTCC AGTGCGACGC AGGTCACAAA GACGGCGACA GCTGGATTCA AAACGACCCG
GTCACCACCG AACTCCTGGG TGACCAGGGC ACGGCCAGGC CGCCGCGGTG GCGGCGAATG
GAGCCCATCT CCTACCGGGC GTCTGCTGTG TTCTATCCGC ACACCGAGCA GTTCGTCGTG
TTCTCAAAAG AGCAGAGCAG CCTGCTGCGG CTGCTACAGG AGGGCAAGCA CCAGGAACTG
GCCGCTTTCG TTGCGGAGCG CTACGGGATG GGGGCCGTCG TGCCGACGGC GCAGAGCATG
CTCGAGACGC TTCGCGCGGG CGGAGAGCAG CACAGGCACA AGGTCCAGGA CTATGAAAGT
ATTGCGCTGA TGCTGAGCAA CCCGCTGATG CAGGCTAACC CCGACATGGC CCGGATGCTG
GAAAAAAGCC TGGAGGACAA GGCTCAGGAC TGGCGAAATA CCCCGGGGCT CATTCCCGTG
GACCGCGAAA TACCGCCATT GCTCTTGAGC CAGGCGCAGC TCAGGGCCGA GTTCGGCAGC
CGCTACGACC CCTTCACCCT GGCCGTGGAG CACGAAGCGC TGAACCGAAG CAAGCTGTCT
GCAACCGCGG GGCTGGAGGG GCGCGCGCCC TTTGTGCGGT TCAACCACTT GGACAAGGAC
TTGTCGCCCA GCACCGAGGC CCTGCGCACG GAGCAGCAGC AGGCCACGAC GCGCCTGATG
GGACTGCTGG GGATGGCAGA AATCGGCCTG ATTCGGGAGT TCGACCTATG CCGATTCACG
CATGGCTTTA CCCGGATGTC CAGCGAGCCC CTGATTGAAA AGAACGACAG CGGTCAGGCG
GTTCACTATC CGGTGCGGCT CAATTTGTTC CCCACCTTGG GTAACGGCAA GCGGCCCGTC
TATGTGGTCA CGCAGGCCAA CGAAGCTATC TATGTGCGGC TGCGCCCGGA ACTGGTCTAT
GCCTGGCTCA AGGGAGTCGG CGTTGGCGAC CTGCCCGAAT GGGACCCGGC GGGCCCGCTG
AAGTTCGGCG CCCACCTGCT TCAGCTGGCA CGTCCCTTCG GAAAGTATTT TTCTGAGCTT
CACCCCGGGC CCGCTTCGAC GTACCGCTAC GTCTACACGC TGCTGCACAC CTATGCGCAT
GTGTTCATGA AGTCCATTTC GGAGTATTCG GGCCTGGACC TGGGCTCGCT CAGCGAGTAC
CTGTTCCCGG CCGATATGGC CTTCGTGGTG TACCGCAACG GCACGACGAT GGACCTGGGC
AACCTGTCTG CCCTGTGGCG CAACTTTAAC AACATCTTCC TGGAGCACCT GCTGGCATCG
AAGACGCTCA TGTGCGGCTC CGGCAGTCTG TGTGACACCA ATCCCCACAA GCCGGGGGCA
TGCCCTGACT GCGTGATGGT TCCCGAGACG TCGTGCCTGG CGAGCAACCA GCTGCTGTCC
CGCGCAGTAC TGCGTGGCGG CCCGGCCCCT CGGGAAGACA AGGACCACCA AGGGCAGGAA
ATCCCTGGCT TCCTGGACAT GGCGCACGCA CATGCCGCAG CTTGA
|
|---|
| Protein sequence | MSYSHKAKTA AGAEIQPPKA PPMTRSRSQV ATAYAPGALF TFEGGLGACL AIPDQQERQT
PADISKETAE QIHLRVREVW QNWFNRASTG GTDKHAALPG QCLDLMLLRE GRYHAPSPSR
FELVDPLQMG YVPAPLAFVC NVCQRFRSFT SVKAAADGLS GLAGEPCGAT GPEHTGKCRW
RQLDVVFIHW SGAWEPPSPG RWEWRASTEK RPGQLHEPMG RCWCGSEKFY LRDNSPRIGQ
WFFQCDAGHK DGDSWIQNDP VTTELLGDQG TARPPRWRRM EPISYRASAV FYPHTEQFVV
FSKEQSSLLR LLQEGKHQEL AAFVAERYGM GAVVPTAQSM LETLRAGGEQ HRHKVQDYES
IALMLSNPLM QANPDMARML EKSLEDKAQD WRNTPGLIPV DREIPPLLLS QAQLRAEFGS
RYDPFTLAVE HEALNRSKLS ATAGLEGRAP FVRFNHLDKD LSPSTEALRT EQQQATTRLM
GLLGMAEIGL IREFDLCRFT HGFTRMSSEP LIEKNDSGQA VHYPVRLNLF PTLGNGKRPV
YVVTQANEAI YVRLRPELVY AWLKGVGVGD LPEWDPAGPL KFGAHLLQLA RPFGKYFSEL
HPGPASTYRY VYTLLHTYAH VFMKSISEYS GLDLGSLSEY LFPADMAFVV YRNGTTMDLG
NLSALWRNFN NIFLEHLLAS KTLMCGSGSL CDTNPHKPGA CPDCVMVPET SCLASNQLLS
RAVLRGGPAP REDKDHQGQE IPGFLDMAHA HAAA
|
|---|
| |