| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4887 |
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| Symbol | |
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| ID | 4685686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | - |
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| Start bp | 60826 |
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| End bp | 61050 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639826529 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_973693 |
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| Protein GI | 121583257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.510239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCAAT CTACCCTCAA CAGCAAGGGC CAAATCACCA TCCCAGCCGA CATCCGGCGG
GCGTTGGGCT TGGTTGACCA TGACCGGCTC ACGCTCACCC TGATGCCCAA TGGAACGGTG
CTGCTGCGGG CCAAGAACAA ATCCATCCTT GACCTCAAGG GCATGCTCCC AACTGCCTCC
GGTATCAGCG TGTCTATTGA GGAAATGAGC ATGGGCTCGG CTTGA
|
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| Protein sequence | MSQSTLNSKG QITIPADIRR ALGLVDHDRL TLTLMPNGTV LLRAKNKSIL DLKGMLPTAS
GISVSIEEMS MGSA
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