| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4878 |
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| Symbol | xseA |
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| ID | 4685812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 54079 |
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| End bp | 55809 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639826520 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_973684 |
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| Protein GI | 121583248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.983312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA TCTTCCTCAC CGTCCCTTTC AAGGACAAAG ACGCCGCCAA AGGTCTTGGC
GCCCGGTGGG ATGCCGCTCA GCGCCAATGG TTTGTACCCG ATGGCCGCGA ACTTGCGCCT
TTTGCTTTGT GGCTGCCGGC GGGTTTGGTC CCGGCATTGA ACTCAGGAGA CGTTCTTTCG
ATTCCGGACG AGCCTGGAAC GCCTGCTATG CCCGTCAGAA ATGGCGTTTC CCTGTCCAGT
CTCCTGGGCG ATGTGTCACG GGCCGTGGCG CAGGCCTACA AGGCCGGGGT CTGGACACTG
GTCGAAGTCG TCGAGCTCCG GGCCAACGGT GGCCATGTCT ACCTGGAAGT GTCCGAGCGC
GACGCCCACG GGGCGGTGCT GGCCAAGGCC CGGGCCGTCA TCTGGCAGTC AACGGCCAGC
GCCATCCTTC CGGAGTTCGA GCGCGCCACC GGCGCCCAGC TGGCGCCTGG CATCAAGCTC
CTGGTGCGGG CCCGGCCTGT CTTCAAGGCC CAGTACGGGT TCAGCCTGGA TATCGATGCC
ATTGACCCGG CGTACACCTT GGGCGAGCTG GAGGCGCGCA AGCGCGACAT CCGGACGCGG
CTTCAGGCCG AGGGGGTGTT TGCCGCCAAC AAGAACCTGC CGCCGCCCTG GGACTTTCAT
AACGTCCTGG TGGTCTCGCC CATGGGCGGG GCCGGCCTGG GCGACTTCCA GGCCGAGGCT
GACCGGCTGC AAGCGCATGG CATTTGCCGC TTCACGTATG CCTTGAGCCG CTTTCAGGGG
GAAGGCGCCC CGGCGGAAAT ACGCGATGCA TTGCAGGCAG CCCTGGGGCA GGGGACTGGA
ACCGTCGCAA CCCCGTTCGA TGCCGTGGTC ATCATCCGCG GCGGCGGCGC TGTCAATGAC
CTGGCTTGGC TCAATGATTA CAGTTTGGCG CGCCTCGTGT GCGACCTGCC CATTCCCGTG
CTGACCGGCA TCGGCCATGA GCGGGACACC ACCCTGCTCG ATGAAGTGGC TCATGCCCGG
TACGACACGC CGAGCAAGGT CATTGCCGGC ATCGAGCAGC GCATCCTCCA GCGGGTCGAC
GAGGTCAAGG CGAACTTCGA GCAGGTCTCA GCCCTGGCGG CCCGGGCCAG CCAGGCAGCC
AGGGAGCAGG CCGGCAAGCT CGACATGACC GTGCGGCTGG AGGCCTTGCG GCATCTGGCC
CAGGGCAGAC AAGCGGCATC GCAGAGCCTG GCAGCCATTC GCATCGATGC CATGCAGTGC
ATGCGGTCGG CCGCTGAACA ATCGCGGGAT GCCTTGCAGG CCGTCAAAAC TAAAGTGTTG
ACGCAACTGG CTGATGCCAA GCGCGGCGTC CCGGCACTGT GGAGCCAGAT TGCCCTGGGC
AGCGAGCATG CGCTTCGAAC GGCCTCGGCA GAAGGCGATT CGTTTATTGG CAGCGTTTTG
GAGCGCGCCC GGCAGGATGC GTCACGCGCA AGGCAAGTCA GCAGTGACGC ATTAAACACA
GTCTCGAATT CGGCCAAGCT GCTTGTTCGG AAAGCTGCGA CCGATTCACA AGCCTTGATA
CGAGAAATCG CTGGGCAGGG GCCGGAAAAA ACACTTCAAC GCGGCTTTGC CATCGTGCGA
AACCAAAGCG GCAAGCCGCT AACCAGGGCC TTGCAGGCAA GGGACGGCGC AGCTATCGAA
ATCGAGTTCC AGGATGGCCG GGTTGCGGCC ATCACACAAA AACGCCTTTA A
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| Protein sequence | MANIFLTVPF KDKDAAKGLG ARWDAAQRQW FVPDGRELAP FALWLPAGLV PALNSGDVLS
IPDEPGTPAM PVRNGVSLSS LLGDVSRAVA QAYKAGVWTL VEVVELRANG GHVYLEVSER
DAHGAVLAKA RAVIWQSTAS AILPEFERAT GAQLAPGIKL LVRARPVFKA QYGFSLDIDA
IDPAYTLGEL EARKRDIRTR LQAEGVFAAN KNLPPPWDFH NVLVVSPMGG AGLGDFQAEA
DRLQAHGICR FTYALSRFQG EGAPAEIRDA LQAALGQGTG TVATPFDAVV IIRGGGAVND
LAWLNDYSLA RLVCDLPIPV LTGIGHERDT TLLDEVAHAR YDTPSKVIAG IEQRILQRVD
EVKANFEQVS ALAARASQAA REQAGKLDMT VRLEALRHLA QGRQAASQSL AAIRIDAMQC
MRSAAEQSRD ALQAVKTKVL TQLADAKRGV PALWSQIALG SEHALRTASA EGDSFIGSVL
ERARQDASRA RQVSSDALNT VSNSAKLLVR KAATDSQALI REIAGQGPEK TLQRGFAIVR
NQSGKPLTRA LQARDGAAIE IEFQDGRVAA ITQKRL
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