| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4855 |
|---|
| Symbol | |
|---|
| ID | 4685726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008759 |
|---|
| Strand | + |
|---|
| Start bp | 32558 |
|---|
| End bp | 33916 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639826498 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973662 |
|---|
| Protein GI | 121583226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.874241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCT CCGAAGACTT GCTGCGAACG CTGCGAACCT GGCACAAGCT GCCCGCCGGG
CAACTGCTTG AGCGCCTCGA TATCAGCCGC GCCACGCTCA TGCGCGCGGT TCGTGAGTTG
GGCTCACAGG TGGTGAGCCG TGGGAAGGCG CGCAGGACCG CCTACGCGGC CCGCCGCCCT
GTGCGGGGCA GCCTGCAGGC GCTGGCGCTG TACCGCATTG ACCGGGACGG CCACGCCCAG
GACGCAGCGA TGCTGTATCC GCTGCACCCG GCTGGATGCG CACTGGACGG CGCCGAGCCG
CTGGAGTGGC CGCTAGACGA GGACATGCGT GACGGCTGGT TCGAGGGGCT GCCGTATTTC
CTGGATGACA TGCGCCCGCA GGGTTTCCTT GGGCGGCACT TCGCCCGGCG TCACGCCGAC
TTGCTTCAGG TCAGCACCGA CCCCAAGGAC TGGTCCGAGG ACGACGCGCT GCATGCACTG
GCGTTGCTGG GCAGCGATGC GCCGGGAAAT TACATCTTGG GCGAGCCCGC CTTGCGTCAG
TGGCTGCTTC ATTCCCAGCA GGAATTGCTG CCCCTGCAAG ACCGTCAAGT GGTGCCTGCC
TACCTGCTGA AGGCTGAGGA GGCGATGGCG CACGGCACGG CAGGGTCCTC GGCAGGCGGC
GAGTTCCCGA AGTTCACGGC GTTTCGCGAG GTGGCGGGCC GGCCGGTTCA TGTCATCGTC
AAGTTTTCAG GCTCCGACGG GGCGCCCGGC ACGGTGCGCT GGTCGGACCT GCTGGTGTGC
GAACACCTGG CCCTGCTCGC CGTGGCCGAG CATTTGGACC TGGAGGCTGC GGTCAGCCGC
ATCCATCAGG CCGGTGGCAG GACGTTTCTG GAGGTCGAGC GTTTTGACCG CCACGGCAGG
CTTGGGCGTT CGCCCGTGTG CTCCTGGGCA GCCCTGAACG CAGCGCTCGT TGGCCTGGCC
GGCAAGCCCT GGCCGCAAGG CGGTGCGGCG CTGCTCGGGC TGGGACTCAT TGACGTCCAA
TGCATGGCGG CCTTGCAGCG GCTCTGGCTG TTCGGGCAAC TCATTGCCAA CTCCGACATG
CACGACGGCA ACCTGGCCTT CAGGCCCGGG CTGCAACTGG CTCCGGTCTA TGACATGCTG
CCCATGCGGT ATGCACCGGT GCGCGGCGTG GAGTTGCCTC TCAAGGATTT TGTGCCACCG
CTGCCCGTGC CTGCGGAAAA GGAGGCATGG CTCACGGCGG CCCACGCGGC CGGGCACTTC
TGGGCAGCCG CCAGCGAAGA TGCACGTATC AGCCCGGACT TCAGGGCTGT CTGCGCACAA
AACGCAGCCA AGGTCCGCAG GGCTCTGGAC ATGGCTTGA
|
|---|
| Protein sequence | MTISEDLLRT LRTWHKLPAG QLLERLDISR ATLMRAVREL GSQVVSRGKA RRTAYAARRP
VRGSLQALAL YRIDRDGHAQ DAAMLYPLHP AGCALDGAEP LEWPLDEDMR DGWFEGLPYF
LDDMRPQGFL GRHFARRHAD LLQVSTDPKD WSEDDALHAL ALLGSDAPGN YILGEPALRQ
WLLHSQQELL PLQDRQVVPA YLLKAEEAMA HGTAGSSAGG EFPKFTAFRE VAGRPVHVIV
KFSGSDGAPG TVRWSDLLVC EHLALLAVAE HLDLEAAVSR IHQAGGRTFL EVERFDRHGR
LGRSPVCSWA ALNAALVGLA GKPWPQGGAA LLGLGLIDVQ CMAALQRLWL FGQLIANSDM
HDGNLAFRPG LQLAPVYDML PMRYAPVRGV ELPLKDFVPP LPVPAEKEAW LTAAHAAGHF
WAAASEDARI SPDFRAVCAQ NAAKVRRALD MA
|
|---|
| |