Gene Pnap_4830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4830 
Symbol 
ID4685798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp13466 
End bp14689 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content54% 
IMG OID639826473 
Producthypothetical protein 
Protein accessionYP_973637 
Protein GI121583201 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.73367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATT CAAATCAAGC TGCAGTGCCC CGCTATCCGG ACGTCTGGCC CAAGGGACAA 
GTTTCATATT TGCCAAAGCT GGTTGCCTCG ACGAGTTCAA AACCGTTTGG CGGCCTCAAG
ACGTCATTCA CTAGTGTGCC TGCTGCGACA AAGCCGTCGT CCAGGTACGT AATTCTTGAA
GCATCTGAGT TGCGCAAGGA GCCTGTCGAG TGGGTACTTA AAGGTGTGTT TCTGCAAAAA
GGAGTTGGCA TGATTTATGG AGCGTCAGGT GCCGGTAAAA GCTTTTTGAC ACTGGACCTT
GCCGCAGCCA TTGCAGAGGG CCGGCCCTGG TTTGGTTGCC GCACGAGAAA CGCTCCGGTG
ATTTACGTCT GTTTGGAAGG CTCTGCAGGT TTCATGGGAC GGGTAAAAGC ATGGGAAGTG
GCCCATGGAC GGTCGCTCAC TAAATTGATG GGTTTTATCT TTGAACCCTT CAGCTTGCTA
AACCCGCAGT GCGTTCATGA ACTGGTGAGC GCCATCATGG AATTTGTCAA AACAGTCCCT
GCCGGTCTGG GTACACCGGT TGTTGTCGTA GACACTCTGA ACCGTGCGAT GCCCGGCGCT
CAAGAAAACG GCTCGAGTGA CATGGGCACT GCGCTGCAAG CCTGCGCAGT GATTTCCGCG
GCAACGGGCG GTTTGACCTT GCTCGTTCAC CACACCGGCA AGGATGCTGA CCGTGGGCCT
CGGGGTCACT CTTCGCTAAA AGGCGCACTC GATGGGGCAC TGTTGGTCGT GCGTTCTGCC
AAAGGAAGGT TTTGGAAATC CGAAAAGGTC AAGGATGGCC CGGACGACCT CCTGTTTGAT
TTTGAGCTTG AGCAGGTGAC GCTGGGCTTG GACGCCGACG GTGACGAAGT TTCCAGCTGT
GTCGTGCGGA GCACCCTGAA CACCGCCGGT CCAATCAAGG CTCCAGCAAT GGCCACCTCG
GTCAAAACGG CTTTGCTCAG TTTGCAGGCT GTTCTGACCC AAACCCGAGC GGCTGCCAAT
TCAGAAGAAA GCTGTATTGT CAGCTTAAAA GACTGGCGCG AAGTGCTTTA CACGAACACT
GCTGCACAGA GCCCGAGCGG AAAACGCAAC GCCTTGAATC GGGCCCTTAA CGAACTGCAG
GGACTCGGTT ACGTGAACGT CAATGGCAAG TTTCTGGAGG TCAACCCTGC TGCATTAGAG
TTTTTGAGCC AGTTGTCCAA TTAG
 
Protein sequence
MNNSNQAAVP RYPDVWPKGQ VSYLPKLVAS TSSKPFGGLK TSFTSVPAAT KPSSRYVILE 
ASELRKEPVE WVLKGVFLQK GVGMIYGASG AGKSFLTLDL AAAIAEGRPW FGCRTRNAPV
IYVCLEGSAG FMGRVKAWEV AHGRSLTKLM GFIFEPFSLL NPQCVHELVS AIMEFVKTVP
AGLGTPVVVV DTLNRAMPGA QENGSSDMGT ALQACAVISA ATGGLTLLVH HTGKDADRGP
RGHSSLKGAL DGALLVVRSA KGRFWKSEKV KDGPDDLLFD FELEQVTLGL DADGDEVSSC
VVRSTLNTAG PIKAPAMATS VKTALLSLQA VLTQTRAAAN SEESCIVSLK DWREVLYTNT
AAQSPSGKRN ALNRALNELQ GLGYVNVNGK FLEVNPAALE FLSQLSN