Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4566 |
Symbol | |
ID | 4685490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 129919 |
End bp | 131268 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639826413 |
Product | outer membrane efflux protein |
Protein accession | YP_973578 |
Protein GI | 121583137 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC GGATGTCCAG AAGAATTAGA AAAAATTGCT GGCCTTGCAT TTTGCTGGTG CTGGCCACAA GCAGCGCCTG GTCGCAGCAA GCGTCACCCG GGTCACTTGG AGAAATTTCA AAGTCCGATT TGTCGCTGGC TGCCGCCTCC TTTCCTGGAA GTATCAGTCT TCCAACAACG CTAAAACAGG TTTTTGACGC CGCATGGCTG CGTCAACCCG AAGCGCAGTC CAAGGAGGCT CGCCAGCAAG CCGCCAGTGC CCGCAGGCTG GTAGCGGACA GTTGGACGGC TGAGCCTGCA GCCCTGGAAT TGTCAACCAA GAGCGATCGA TTGAATAACA ACCAGGGCAG CCGCGAGCTT GAGGCCGGCT TGGCTATTCC GCTATGGCTA CCAGGCGAGC GAGCGCGTTC CGTCAACCTG GCCGATGCGG AGATGCGTGT GGCAGCGAGC CGGGTCATGG CGGCTCAGTT GCGCACGGCG GCAAGCGTGC GGGAGTCGTA TTGGCTATGG CAACGTGCCC GGATCGAGCA AGATCTTTCC CGGGAACGGC TAATTAATGC ACAGCAGTTC GCTGCTGACG TCGCCAGGCG TGTCAAAGCC GGCGACCTGG CGAGGGCCGA TCAACACCAG GCCGATGGGG CGGTGGCAAC TGCCGAGGCA GGACTTGCCG AAGCAATCAG CGCGCTGGCT GGCGCATCAC ATGAGCTGCG GGCACTGAGC GGTATCCCAC CAGGACCGAA CGCCCTTCCC GCGCTCGACG CGCAGGCTGT GACCGAGCCT GTCCCGGAGG TACCTGCTGA TTTCGCAATT CTGAATGCCG GCCACCCGGC GGTTGTAGAA CTGTTGGATC GGGCGAACGT CGCGCGCCGC ACAATCGAAC TGACCGGTGT GCAAACGCGC GCGAACCCAG AGTTGATGCT GGCGACGACC AGAGGTCGGG GGTTCTCCGG CGAGCCTTAT CAGCAAACCA TCACGCTGGG CATTCGCATC CCTTTTGGAG CAGACAGTCG CAATCGAGCC AAGCAGGCAG CAGCACAAGC CGACGGTATT GAAGCCGAGG CACAGCTTGA TCTCGAGCGG GGGCGGCTGG TGTCTGAACT CGACGCGGCC CGCGTTCGCC TCGAATCCGC CCAAACGCAG GTGAATGCTG CAAGCAAGCG TTCTCAACTC GCCCGTGAGT CACGCAGCTT TTTCCAAAAA TCATTTCGCA TGGGTGAAAC CGACCTGCCG ACACGATTGC GCGTTGATCT TGAAGCTTCC GATGCCGAAC GACAGGCCGG ACGGAGCCGC ATCGATCTCG CTGCAGCAGT CTCAGCCTTG CGCCAAGCCC TGGGACTGCT TCCTGAATAA
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Protein sequence | MENRMSRRIR KNCWPCILLV LATSSAWSQQ ASPGSLGEIS KSDLSLAAAS FPGSISLPTT LKQVFDAAWL RQPEAQSKEA RQQAASARRL VADSWTAEPA ALELSTKSDR LNNNQGSREL EAGLAIPLWL PGERARSVNL ADAEMRVAAS RVMAAQLRTA ASVRESYWLW QRARIEQDLS RERLINAQQF AADVARRVKA GDLARADQHQ ADGAVATAEA GLAEAISALA GASHELRALS GIPPGPNALP ALDAQAVTEP VPEVPADFAI LNAGHPAVVE LLDRANVARR TIELTGVQTR ANPELMLATT RGRGFSGEPY QQTITLGIRI PFGADSRNRA KQAAAQADGI EAEAQLDLER GRLVSELDAA RVRLESAQTQ VNAASKRSQL ARESRSFFQK SFRMGETDLP TRLRVDLEAS DAERQAGRSR IDLAAAVSAL RQALGLLPE
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