| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4469 |
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| Symbol | |
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| ID | 4685621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 30096 |
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| End bp | 31088 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639826322 |
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| Product | Rad3-related DNA helicases-like protein |
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| Protein accession | YP_973487 |
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| Protein GI | 121583046 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0968334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 7.6564e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTCGC TTGCAATGCA AACCCCAGCT TCGCCAACCG TGCCGGCAAC TGGCCCTGCA
CAGCTGCCGG CCGTGGTGCC CGTGTACGCG TGTGAGCACG GGATCGATGC CGAGCAGCTC
GAAGCTGCGC GCATCCGCCT GGAGCTGCTT TACGGCGAAG TCGCCGCTGA CTGGCCCGGC
TTCATCGCCC GGCCGGGCCA GTACGAGATG ATGCAGGCGT GCCTGCTGAC ATTCCTCTCG
GCCAAGTCGC CCGAGGACGA AAAACGCTCC GGCAACCACT TGGCGCAGTT AGAGGCGGGC
ACGGGCACGG GCAAGACGGT AGCGTACTGC CTGGCGGCCC TTGTCGCGGC CGAGGTGCTC
AAGAAAACCG TGATGGTCTC GACCGCCACC GTGGCGCTGC AGGAGCAGCT CATCCACAAG
GACCTGCCGC GCTTATCAAG CATCATTCCC GAGTTGACGT TCGACATCCT CAAGGGCCGG
GCCCGCTACG TCTGCCAAAG CCGCATGGAA GGCATGATCG AGGGCATAGT GCCCGGCAGC
GAACTTGCGG GCGAACTGCA GGACCTCTTT GCCGACAGCC GCAGGCCTAC GGCAAGTGTG
GTGCGCGACC GTCAAGCGGC CATGCGCTGG TTCAAGAGCA GCGCAAAGAA ACTCAACGCC
GGCGCCTGGG ATGGGGACAT TGACTCCCTG GCTCAGTCGC CCAATCCGCA GGATTGGCGA
CAGGTCCAAG CCAATGCCCA CGCCTGCAAT GGCGGTCAAT GCGAGCACTT TCGCAACTGC
GCTTTTTTCA AGGCCAGGCG CCAGGCGGCC GGCGCTACCT TGCAGGTGGT CAACCATGCG
CTGGTGCTCG CCACACTGCA GACCGACAGC AGCCTGATCG ATGCGGGCAA CACCTTGTTT
GTGTTCGATG AGGCGCACCA CCTGCCGGCC ATCGCGGCCG AGCAGTTCCC CTACCGCGCG
CGCCTGGGTG CGAGCACCCG GCTGCTATTT TGA
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| Protein sequence | MSSLAMQTPA SPTVPATGPA QLPAVVPVYA CEHGIDAEQL EAARIRLELL YGEVAADWPG
FIARPGQYEM MQACLLTFLS AKSPEDEKRS GNHLAQLEAG TGTGKTVAYC LAALVAAEVL
KKTVMVSTAT VALQEQLIHK DLPRLSSIIP ELTFDILKGR ARYVCQSRME GMIEGIVPGS
ELAGELQDLF ADSRRPTASV VRDRQAAMRW FKSSAKKLNA GAWDGDIDSL AQSPNPQDWR
QVQANAHACN GGQCEHFRNC AFFKARRQAA GATLQVVNHA LVLATLQTDS SLIDAGNTLF
VFDEAHHLPA IAAEQFPYRA RLGASTRLLF
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