Gene Pnap_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4340 
Symbol 
ID4685463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp253051 
End bp254166 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID639826199 
Producthypothetical protein 
Protein accessionYP_973364 
Protein GI121582922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAC CTGCTTCCTC CCAATGGCAC TTCCCTCGAC CGGCCCTTGC CCAAGCTTAC 
CTAGCATCGC TCAATCTTGG GCTTTCAAGC GCCCGAGGCC TGTTCGCAAG GCGGCGCATG
GGCAAGACGG AATTCCTGGT GGAGGACTTC ATGCCGGCGG CGCGGGCCGG CGGGTACAGC
TGCGCTTACG TGAACCTTTG GGAGCTTAAA AGCGATCCCG CCACGGCGCT GGTTTTAGCC
TTGCATCAGG CCATTGAGCC CAAGAGTTTT GCCAAGGTAT GGGAGCGGTT GAACACGCCG
ATTTCAAAAA TCAAGGCATC CGGCAAATTC GCGGGGATGG CCGAGGCGGG TGTTGAAGCC
GAGCTTGGCA ACAGGCACCA GGTCGCGGGC ACGCTGCTGA TGCAGGCGAT GGCCGAGTTC
GACAAATACA AAAAATCTCT CGTGCTCATC ATTGACGAAG CGCAGGTGCT CGCTGCCGCG
GAGAATTCCG TCTTTGCTCA TGCGCTGCGC GCCGCACTGG ACATCCGCAA GGATCGGCTG
AAGGTGCTGT TTGCGGGCAG TTCGGAGACC ACTTTGCGCC GGATGTTTGG CCGGGCGTCG
GAGCCGTTCT ACAACTGGGC GGCACTGGAG CCGTTCCCGC TTCTGGGTGT GGAGTTCGTG
GCGTTCATGG TGGACAAGGT GGCGCAGATT TCCCGGTTTC CCTTGCCCTT GCCTGATGCG
CTGCAGGCAT TTGACGCGCT CAAGCAAACC CCCTTGTTTT TCCGCGACTA CGTGGAGCGA
TACCTCACCC ATCCCTTCGA AGGAACCCAG GGCGCACTGG ACTTCACCAG GGCGAAGGCT
TTCAACGACG GCGAATTCGA AAAGCAGTGG AAGGACCTCC TGCCAGCTGA CCAAATACTG
CTGGCTCTCA TTGCCCGCGA CACGTCTGAT CTGCAGGGGC TCGAAGTGCG CACTACGGTG
GGCGCACGCC TGGGGATTGA AAAGCCCGTG CCCGCTGGTG CAGTTCAAAA CTCCCTTCGG
CGCTTGGTCG ACAAGAGCGT TATTACCCGG ATGGACCGGG GCGCTTACCG TATCGAGGAT
GAGGCGTTTG CCGACTGGGT GCGCCATCAG GATTAG
 
Protein sequence
MIAPASSQWH FPRPALAQAY LASLNLGLSS ARGLFARRRM GKTEFLVEDF MPAARAGGYS 
CAYVNLWELK SDPATALVLA LHQAIEPKSF AKVWERLNTP ISKIKASGKF AGMAEAGVEA
ELGNRHQVAG TLLMQAMAEF DKYKKSLVLI IDEAQVLAAA ENSVFAHALR AALDIRKDRL
KVLFAGSSET TLRRMFGRAS EPFYNWAALE PFPLLGVEFV AFMVDKVAQI SRFPLPLPDA
LQAFDALKQT PLFFRDYVER YLTHPFEGTQ GALDFTRAKA FNDGEFEKQW KDLLPADQIL
LALIARDTSD LQGLEVRTTV GARLGIEKPV PAGAVQNSLR RLVDKSVITR MDRGAYRIED
EAFADWVRHQ D