| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4330 |
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| Symbol | |
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| ID | 4685382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 240107 |
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| End bp | 242020 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639826189 |
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| Product | hypothetical protein |
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| Protein accession | YP_973354 |
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| Protein GI | 121582912 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.930628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT ACGAAGATAT GTTTCGGCCA GCACATGAGG GTTATGCCGT TGCCGGTTGG
GCAGCCGGTG CACTGCTGCT CGTTTTGTTC AGACCACCAT TTTGGTGGGC AGCGTTCCCA
GTCATTCTTG TCATGCTGAT GTTTCGAGGT GGCCAGCTCG AAACACTTTG GAAATTTCGC
TTGTCGCTCG CTGTCATGCT AGCGCCTACC ATTCCAATTC TCACGCTCCT GGCCAAGTCG
CGCCAGATGC GAAAGCAAAA AAAGAGCTTG TATCTAGGGC GTGGTTTCCA GTGGGGTCAG
CGCCATGCGG AGATTGCGCA GCAGGTGATG AATCGCAATA TCACCGAAAT ACCTGACCTT
CCTGATTTCC TGAAGAAACA CATCGAGAAG ATTCTCGAAA CGCCACCCCA TGATCGCACA
GCGATTCAAA AAGCAGCCTC TGTCTTCGTC AACCGGTTGA TGCCAAAGCA CACAAAGGTC
ATGAATGAAG CCGCTCTTGG CCTGCCCTGG ATTCACGGCA TTGGCGCGGT GGAGGATGAA
GACATTTCCC TTCCGCTCAG TGTACTGACC GGCCATACGT TGATTCTTGG CACGACTCGC
GCTGGCAAGA CGCGACTGTT TGAATTGCTC ACCACCCAAG TAATCGATAT GGGATCGGCT
TTGATTGTGA TCGACCCGAA GAAAGACAGA GATTGGGTCA ATCGCCTGCG CATGGAGTGC
AAGCGCAAAG GGCGGAAGTT TCTCTATTTT GATGCCGCCA AGCCATCCGA ATCTATCCGG
ATCAATCCAC TGGCCAACTG GAACAACATC AGTGAGCCAG CTACCCGGAT TGGGCAATTA
GTGGATGCAG ATGGGAGCTT TGCCGCCTTC GCCTGGAAAA CGCTGGTCCG TGTGCAGCGC
GGCCTGGTGG CCGCTGGCGA GAGGCCCAGC ATCAAGAACA CCAAGCATTA CGTTCAAATG
GGCGTCGATT CCCTGGCTGA ACGTGTGCTA ACGGTTCACT TCATGAAAAA GTATGGTCCT
GAATGGGACA GGGACATCAA GAATTCCGGT GTTAAGGATG GTCCCGCAGG TCAAAAGGGG
CCGCCTAGCC GGCTCGACTT GATGATTGCC AAGTTCATCA AGGACAACGA ACCAGACGAT
GCAATCGCAG GATTGATTTC CATGATCACC CATTCCAAGG AACATTTCAG CAAAATGATC
CAGGTGCTTG AACCTATCCT GGAGATGCTC GGTTCTGACG AAATTGGTGA CCTGCTTTCG
CCTGATCCGA CAAACCTGGA GGACAAGCGG CCGATCTATG ACATGCGCAA AGTCATCGAC
GAGAAAGCTG TTCTCTATGT GGGCCTTGAC TCCCTGTCCA ACAAAACCAT CGCGCAAGCC
ATCGGTTCGA TCTTATTGGC CGACATTGCT TCGACGTTGG GCTCCATCTA TAACTTTTCC
TCCAACCCAG CCGACTGCTA CTTGTTTGTT GATGAAACCG CTGAAGTTGC CAATGACCAG
CTGACCCAGA TTCTGAACAA GGGGGGCGGG GCAGGGATGA AGGTGTTCCT GGCCATGCAG
TCCATCGCTG ACTTGAGCGT GTGTTTTCAG AGCAAGAAGG ATAAGGCGGA GCAGATGCTT
GGTAACTTGA ACAATCTGAT CTCCCTTCGC GTTCAATCGG TGGAAACGGC GCAGTATGTG
TCGGACAAGT TTTCGGAGGT CGGCACCCGT GCCATGGACG TTGCTTTTTC CTCAGGCTCG
GGTTCTTCTG AAGCGTTCAC TGAGTTCCGC TCCAACGTTT CGCGCAGCCT TAAAACCACC
AACACTGCGC TTGTGTCCCC GGCGCTGCTG ACAAAGCTTC CGCCGCTTCA CTATTTCGCC
TTCATTGCCG GGCGAAGCTA TATCAAAGGG TGCTTGCCCT TCATTGGCGA ATAG
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| Protein sequence | MRKYEDMFRP AHEGYAVAGW AAGALLLVLF RPPFWWAAFP VILVMLMFRG GQLETLWKFR
LSLAVMLAPT IPILTLLAKS RQMRKQKKSL YLGRGFQWGQ RHAEIAQQVM NRNITEIPDL
PDFLKKHIEK ILETPPHDRT AIQKAASVFV NRLMPKHTKV MNEAALGLPW IHGIGAVEDE
DISLPLSVLT GHTLILGTTR AGKTRLFELL TTQVIDMGSA LIVIDPKKDR DWVNRLRMEC
KRKGRKFLYF DAAKPSESIR INPLANWNNI SEPATRIGQL VDADGSFAAF AWKTLVRVQR
GLVAAGERPS IKNTKHYVQM GVDSLAERVL TVHFMKKYGP EWDRDIKNSG VKDGPAGQKG
PPSRLDLMIA KFIKDNEPDD AIAGLISMIT HSKEHFSKMI QVLEPILEML GSDEIGDLLS
PDPTNLEDKR PIYDMRKVID EKAVLYVGLD SLSNKTIAQA IGSILLADIA STLGSIYNFS
SNPADCYLFV DETAEVANDQ LTQILNKGGG AGMKVFLAMQ SIADLSVCFQ SKKDKAEQML
GNLNNLISLR VQSVETAQYV SDKFSEVGTR AMDVAFSSGS GSSEAFTEFR SNVSRSLKTT
NTALVSPALL TKLPPLHYFA FIAGRSYIKG CLPFIGE
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