| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4320 |
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| Symbol | |
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| ID | 4685363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 229820 |
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| End bp | 232252 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639826179 |
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| Product | putative DNA repair ATPase |
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| Protein accession | YP_973344 |
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| Protein GI | 121582902 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.480369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.867818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCA ATAAACTCAT GCTTGAGCAT TTCGAGGGAA TCGAAAGAGG TCGCGGCAAG
GATCGCATTG AGGTGGACTT CACGAAAGTC AATCCCAATG CAAAACTGGT GGCGCTGTTC
GGTCCCAACG GAAGCTGTAA AACTACTCTG ATGGACAACA TGCACCCCTA CCGGGTCATG
CCATCGAGAG CGACTTCACC AACCCCCACG GCGTTCAGCT ACTACCTTCA CGTCATACCA
GGCAAAAATG CGCTGAAAGA TATTTTCTGG TCCCACAAGG GCCGTGAATT TCGCAGCGTC
ATTCGAATTC GGACAACGGG AAAGACGAAT AAGCAAGAGT GCTACCTGAC CGAAAGGGTG
GGTGAAGACT TCTTGCCCTA TGAGGACACC ACCGGGCTGG TTAGTGATGG CAAAACCGAT
ACCTATGACC GCGCAGTAGA AGCCATTCTC GGGAAACCGG AAGTGTTTTT TGCCACGCAG
TTCAGTGCCC AGGGAAAAAA GCCGATCAGC ACCATGACTG CTGGTGAAGT CAAAGCCCTC
ATGGCCGCGA TGCTGATTAT GGGCAGCTTC AAAACGCTTT CTGAAAAAGC CAATGAAGTG
GTCAAGGGTC TGAAGCCGCA CCTCAGCGCA TTTCAGTCGC AATTGCTTCC TCTTGAGACG
AAAATTCTCA AGGAACAGTC GCTGATTGAA CTGCGCGGTA ACCTGCAGCG CGAGATGCAA
GTCAATGCTG AAAAAGTTTT GCGGCAAAAG TCGCTCATCA AGGAAGGCAG TGCAACGCTG
TCGGCCTTGG AGCTCAAGCT GTCCCAGCAA GAAAGCGTGC TGGCCCAGCG GTCGTCGCTG
CAAATGCAGC TCGGATCAGT CGTGTCTCAA AATGCGGCTG AACTGGCTGC CTTCGAAGCG
AAGCAGGTTG CCGAAAGAAA ATCAGTGGAG GCGGCCGATC AAAATAGCCG CAATGCTGTA
CGGGTCGCGC AGTCTGCATA TGACGATGCT TCGCTTCGGG TCACCGAGAC GATGGCAGTC
ATCGCTACCG AGAAAGAGAT TGAGCAAGCG CGGGTTTTTC ACCAAACCAA CGTGCCGGTT
CTTAACAGGC TTCGGGGCCA GCAGACTGAT TTGTATGTGG ACATCAACAA GTTCAATGAG
CTCACCCAAT TGGTAGCCAA AATGCGTGAA AGCTTTGCAG CTGACAGGCA AACGGGCATT
GCCATGAGTG AGGCGGTTGA AACGGCCAGA CAGATAGCGG CCTTGATCGG TGAGGTGCCA
TGTGCGGGTC ACCGTTTTTC GGGTTCGTGC AAGCTTCTAG CCGAAGCGAA CGGAGCTGCT
GTTGGCTTGG CGGGCAGGCA AGCCAAGGTC GTCGAGTTGA GAACCCGCCT TCAGGGGGAT
CAGGTCAGGA TCAAAAACAA CAATGCAGAG CTGCAGCGCC TGATTCAGGT CAATGCTGAG
AGGGAGGTAC TGTTGGGCAA GATCGCAGCC CTTGAGCTTG CCTTGAGTAA TGCAAAAGCC
GTCCTGAAAG GGGCTCCTGC GCTTGAAAAA GCAAAGCAGC AACTCGATAG CTACCGGCAG
TCTGCGTTAC AAGCAAAGTC TGACCTTGCC AATGCAAAGA CCATTCACAC AGCAGCTCTG
GGAGCGGTGA ACAACATCCT GGCCAAGCAG CAAGGTGATA AGTCGATATT CATGTCTGTT
CTCTACAAGG AAAAGGACAG GATTCAATCG GCCATCAGCG AGTTGCCGGT CCTCATCCAG
GACTATGAAG TCAACGAGGC AAGGAAGGCT TGGCAATATG CCGAGCTGAT GCTGGAGAAC
GAAGAGAAAT TGCGCGACGG GCTGGTCAGT CGTTTCAATA ATGTGGTTTT ATCCATCAGT
GATATAGCTG CTTCAAATGC AAAAATATCG CAAGTCACCT CTGTGTGCGA TGCAATTTCC
AATGAGATTT CTCAGTGGAG TTTGTTGTCG CGTGCGATGG GAAACGATGG GATTATTGCC
ATGTCAATCG ATGACGCGGG ACCCGAGATC AGCGCTTTGT GCAATTCATT GCTCAAGGAC
TGCGCGGGCG GTCGATTCAA TATCAGCTTG AGCACGCAGG CCGCTACGGC TGGCGGAACG
CTGAAGGAAG CCTTTCTCAT CAACGTCGAG GACGTGGTGC GCGGTGGCGA GCCGACAGAG
CTGAACTTTA TGTCCGGTGG CGAAAAAGTT TGGATCAACG AATGCCTTGT AAGAGCGATG
GCGCTGTACA TGTCGCAAAC GACGGCATCA AGCTTCAAGA CCCTCTTCAG CGATGAGGCG
GACGGTCCCC TGGACCCTGA GCGCAAACGG CAATACATGG CGATGAAACG CACTGTACTT
GAACGTGGCG GTTATGACCG TGAATTCATC ATTACCCAGA CACCCGAGCT TTTGCTTATG
TGTGACCAGG TGATCGATGT GACAAAACTT TAA
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| Protein sequence | MQVNKLMLEH FEGIERGRGK DRIEVDFTKV NPNAKLVALF GPNGSCKTTL MDNMHPYRVM
PSRATSPTPT AFSYYLHVIP GKNALKDIFW SHKGREFRSV IRIRTTGKTN KQECYLTERV
GEDFLPYEDT TGLVSDGKTD TYDRAVEAIL GKPEVFFATQ FSAQGKKPIS TMTAGEVKAL
MAAMLIMGSF KTLSEKANEV VKGLKPHLSA FQSQLLPLET KILKEQSLIE LRGNLQREMQ
VNAEKVLRQK SLIKEGSATL SALELKLSQQ ESVLAQRSSL QMQLGSVVSQ NAAELAAFEA
KQVAERKSVE AADQNSRNAV RVAQSAYDDA SLRVTETMAV IATEKEIEQA RVFHQTNVPV
LNRLRGQQTD LYVDINKFNE LTQLVAKMRE SFAADRQTGI AMSEAVETAR QIAALIGEVP
CAGHRFSGSC KLLAEANGAA VGLAGRQAKV VELRTRLQGD QVRIKNNNAE LQRLIQVNAE
REVLLGKIAA LELALSNAKA VLKGAPALEK AKQQLDSYRQ SALQAKSDLA NAKTIHTAAL
GAVNNILAKQ QGDKSIFMSV LYKEKDRIQS AISELPVLIQ DYEVNEARKA WQYAELMLEN
EEKLRDGLVS RFNNVVLSIS DIAASNAKIS QVTSVCDAIS NEISQWSLLS RAMGNDGIIA
MSIDDAGPEI SALCNSLLKD CAGGRFNISL STQAATAGGT LKEAFLINVE DVVRGGEPTE
LNFMSGGEKV WINECLVRAM ALYMSQTTAS SFKTLFSDEA DGPLDPERKR QYMAMKRTVL
ERGGYDREFI ITQTPELLLM CDQVIDVTKL
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