| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4318 |
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| Symbol | |
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| ID | 4685312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 227441 |
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| End bp | 228844 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826177 |
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| Product | DNA repair exonuclease-like protein |
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| Protein accession | YP_973342 |
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| Protein GI | 121582900 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.677923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG GAAAATACGC AGGGAACACC GTGCGGGTGG CTCAGATGAC AGACTTGCAC
TACTGTGCAA CCAACCTTGA AGAATCGGAT CGATGCTTCA CTGCGGCGGT CACAGATGCG
ATCGAGAAAC AAGTCGATTG CGCCCTGATT ACCGGCGACA GCACCGATCA TGCGATGGAC
GCCCACAGCC CGGCTTTCGT GGCGCTGGCC AAGCAAGTCC AACGGCTTGC CAACCATTGC
CCGGTACTCA TGCTGCAAGG CACCTTCAGC CATGAGCCAG TTGGGCTTCT CAAGGTACTT
TCTATGGTCG GGGCAAAATT TCCGATCATG ATTGCAGAGA AGATCAGCTC GTTCGGATTG
ACCAAGTCGA AAGGGTTTGA ACTGATCATC CCCAACAACG ACTATCGCCT GGTATGCACG
GCTATACCGA CGCTCAACAA AGCCGATATT GCGGCCATGA CCGAGGACAG TGTGGGCGCT
GCGGCAGAAG AAGCAGGGCG GATCATTTCG GACCTCCTGG CCAGCCTGGC GCCTATGAAC
AGGGCCCTGC GCCTACAGGG AATTGCGTCG ATGGTGATCA GCCACGGCAC GGTGATGAAC
TGCCTGACAG AGCACGGCGT GCCCATGGCG GGTTTTGACC ACGAGTTCAC GGCCGGCTCG
CTATTTTCAG CGGGCGCGGA CGCCGTAGCG CTGGGTCACA TTCACAAGCA TCAATCCTGG
GAGAGTGATA CGCAGGGATT TCGCCAGACC ATTGCCTACG GGGGCTCAAT CGGGAGATTT
CACTACGGCG AAGAAGATGC GAAGGTTTGG CTGGAATGGC ACATGACAAG CGGTCAGGCT
TCGTTTGTGG CTTATGAAAC GCCGGCTCGT CGAACAATCG ATATTTTCTT TGACGGCCCG
CCGGACATGG AAAAAATCCG TGCAGCTGCT GCTCAATGCG AAGGCGCCTT TGTTCGCGTT
CGCTATGAGG TGGACGCAGA GCACAAGCAA AGCGTTGACC GCAATGCCAT CAAAGCCATC
CTCGGGTCAG CCTTGCACAT CCAAATTGAA GGGACAACGC TGGCTATCGA GCGGGTGCGG
GCCAAAGGCA TCAGTACAGA ACCATCGCTG GTCGGGAAAC TTGAAAAGTG GTGCGAGGCA
ACTGGTACCA AAGTCGGCAT CCTGCCAGAG ATGCTGACCA TGATTCAGAA CCAGGACGCT
CAAGCGCTGG TGGACAGTAC GATGAAACGG ATCATGCAGC AGGTGATGCC AGTGGCTGAA
AAGCCCATTG AAACCGCTGC AGCTGAACCA GCCAAGCTTG CCACGGCGCC AGTTCCAATT
CCAAAAGTTG ATGTCAAAAA AGAAACGATG AGTCGCGGTT TCTTTGAAGA TGACTTGGCG
ATTGAGGATC GCACGCTATT TTGA
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| Protein sequence | MTQGKYAGNT VRVAQMTDLH YCATNLEESD RCFTAAVTDA IEKQVDCALI TGDSTDHAMD
AHSPAFVALA KQVQRLANHC PVLMLQGTFS HEPVGLLKVL SMVGAKFPIM IAEKISSFGL
TKSKGFELII PNNDYRLVCT AIPTLNKADI AAMTEDSVGA AAEEAGRIIS DLLASLAPMN
RALRLQGIAS MVISHGTVMN CLTEHGVPMA GFDHEFTAGS LFSAGADAVA LGHIHKHQSW
ESDTQGFRQT IAYGGSIGRF HYGEEDAKVW LEWHMTSGQA SFVAYETPAR RTIDIFFDGP
PDMEKIRAAA AQCEGAFVRV RYEVDAEHKQ SVDRNAIKAI LGSALHIQIE GTTLAIERVR
AKGISTEPSL VGKLEKWCEA TGTKVGILPE MLTMIQNQDA QALVDSTMKR IMQQVMPVAE
KPIETAAAEP AKLATAPVPI PKVDVKKETM SRGFFEDDLA IEDRTLF
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