| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4315 |
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| Symbol | |
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| ID | 4685336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 222675 |
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| End bp | 224534 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639826174 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_973339 |
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| Protein GI | 121582897 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.277671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT ATTTCAGCGA TCTGAATGAA GGTCAATTCC AGGCGGCAAG CTGCGAAACG
CACTGCTTGA CTATTGCAGC GCCTGGCTCT GGCAAGACCA AAATGCTGTC TGCAAAGGCG
TCATACCTCT TGTCACAAAA CAAGACGGTT ACGGCTGTCA CCTTTACCCG CGATTCGGCC
CTTGAGCTGC GTGACCGGAT CGTCAAACAG GCCGGCATCG ATGTGATGTC GCGGTTGCTG
GTGGGCACCT TTCACAGCAT TGATCTGCTG ATGGCCTTCC CCGGCAAGGC GAAATCGGCC
ATGGGTTCCA AAATACTCAG GCACTCCCGC TCGTCGCTGT CGCAAAGCTG GGTCATCGTC
AAGGAAGGCA ATCGGCGCAG TGCCGTGGCG CGTGCCTTTG ACGCTGCCGC CGTGCCGGGG
CTCGAACTCG ATGATGCCAC CGCGCTGATT GAAGGCATCA AGTCGGGCCA GGTAGCGCCC
AAGTGCTATG AAGAAGAGCT GCTGGTTAAA ACGTACACCG ATGTGCTTGA ACGCCATGGC
GTGATCGACT TCCAGGATAT TTTGCTCAAG ACCAATGAAG GGATCAAGGA TGGAAGGATC
TCGACGCTCA GGACGGACTA CCTCCTGCTC GACGAGTACC AGGATACCGA CTTGCCTCAG
CTTACCTGGA CCATGCACCA TGCCAAAACC GGCTCCATCA TCACCGCAGT AGGGGACGAT
GACCAAAGTA TTTACGGTTT CCGAAGGGCG CTCGGATTCG GCGGCATGCT CAGCTTCGAG
AATGATTTGC GCGCTACCCG TGTCGTCCTG GGGCTGAACT ACCGTTCACA CAGCGAAGTG
CTGGAGCCGT CAGCCAAGCT GATTGCGGTC AACTTGAACC GCATGGACAA GGCTTTGGTG
TCCAACAAGG GGCCGGGCGG CGCCACGGCA TGGGAGCGGT TTGCCTCGCG CAAGCTTGAG
GCCATCGCGT GCGCCCAAAC CATCAAAACG TCCCTTGAGG AAAAGCAAAG CGTCGGCGTG
CTGGCACGAA CCAATAAACG CCTTGATGAG ATCGAAACGC AATGCATCGC CTTGGAGATA
CCCTACAGCC GCTCAGCCGG TGGTTCAGTG CTGAAGACGC GGGAAATGTC AGTGTTCATG
TCCGCACTGA GCTGCATGAC CCGAAGCAGT GCAAAGGACA CCGATGAACT GCTGGCCTGG
TGTGGTGTCG ATGAACAAGA TCTGACAGCG CTCTACCAGA CATTCGGTGA TGGCTTGTTT
GACGTGGCGC GAAAACGCAC TGACATTGGC AAGGCTCCAA TCAAGGACGC AACTAAACTC
CTGGTCGCAA AACTTGCCAA GTCATTTTCT GACTGGAAAG CGTTCATCAG AACCGGTGGC
TCGTCGATGG TGGTGGACGG CGTTGTGCAA TTGCTCGGCA GCTATACGGA AGACAAATAT
TCCAAAAAAA TGCTTGAGAT CGTTGCAGGC GTTCTTACCC CGCCGATCAA TGAGAATGTT
CCGCTGAACA AAGCCCAGGA ACATTTTGAA TGCAGATTGA ACACCATTCG GGCTGCAATG
GAGCGTCCAA AAACAAAAGA GGATGAGGCT GGCAAGCCAG TGGTCTTGAT GACTGCGCAC
GGCTCAAAGG GGCTGGAGTT CGATATGGTG TGGATCGTCG GCGCAGAGGA GGACACCTTT
CCTGACAAGG CCAGCTCTGT GCAAGAAGAG CGCAGGCTCT TTTATGTGGC CATGACACGC
GCACGCAAGC ATCTGTGGAT TTCGGCCAGC GGCAAACTTG ATGTGTCCCG GTTCGTCTTT
GAATCGGGCG TGCCACGTGT GCCTGACGGC ACCTTCCAGA CCTACGATGG GGACCACTAG
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| Protein sequence | MPDYFSDLNE GQFQAASCET HCLTIAAPGS GKTKMLSAKA SYLLSQNKTV TAVTFTRDSA
LELRDRIVKQ AGIDVMSRLL VGTFHSIDLL MAFPGKAKSA MGSKILRHSR SSLSQSWVIV
KEGNRRSAVA RAFDAAAVPG LELDDATALI EGIKSGQVAP KCYEEELLVK TYTDVLERHG
VIDFQDILLK TNEGIKDGRI STLRTDYLLL DEYQDTDLPQ LTWTMHHAKT GSIITAVGDD
DQSIYGFRRA LGFGGMLSFE NDLRATRVVL GLNYRSHSEV LEPSAKLIAV NLNRMDKALV
SNKGPGGATA WERFASRKLE AIACAQTIKT SLEEKQSVGV LARTNKRLDE IETQCIALEI
PYSRSAGGSV LKTREMSVFM SALSCMTRSS AKDTDELLAW CGVDEQDLTA LYQTFGDGLF
DVARKRTDIG KAPIKDATKL LVAKLAKSFS DWKAFIRTGG SSMVVDGVVQ LLGSYTEDKY
SKKMLEIVAG VLTPPINENV PLNKAQEHFE CRLNTIRAAM ERPKTKEDEA GKPVVLMTAH
GSKGLEFDMV WIVGAEEDTF PDKASSVQEE RRLFYVAMTR ARKHLWISAS GKLDVSRFVF
ESGVPRVPDG TFQTYDGDH
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