| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4275 |
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| Symbol | |
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| ID | 4685355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 166679 |
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| End bp | 168343 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639826134 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_973299 |
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| Protein GI | 121582857 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0143761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAAC CGCAAGCCTG GCTTCCGTCC GACGGACTGA CACTCGAGCC CAATGCGCTG
CTGGCAGCCC AGGAGGTCCT GCGCAGCTTG GCCTTGACCG CCGGCCCGGG AGCCGGCAAA
ACCGAGATGC TTGCGCAGCG CGCCGACTTT CTGCTGCGAA CCGGAACCAG TCGGTATCCA
CAACGCATCT TGGCCATTTC CTTCAAGGTG GACGCCAGCC GCAATCTCAA GGACCGGGTG
CGCAAGCGCT GTGGTGCCGA GCTGGCGGCC CGTCTGGACA GCCATACCTT CCATGCCTTT
GCCAAGCGCA TCATCGACCG CTTCAGGCCT ATTCTGACCG GCAGGGATGC ACTCAACCCC
GATTACACGA TCGGGGTCGG GCGCGTGCAG GGTCAACAGT TGGACTTTGG GAACCTGGTG
CCGCTGGCCG TGCAAATCCT TAAGGCTTGC CCGATCGCCT GCAATGCCGT GCGTCAAACC
TACAGCCATG TGTTCCTCGA CGAGTTCCAG GACTGTACCG ATGAGCAATA CCAACTCATC
AAGGTGGCAT TCCTCGGCTC GTCAGCACGC CTGACAGCGG TCGGGGACAC AAAGCAGCGA
ATCATGGGCT GGGCTGGCGC ACTGGAAGGC GTGTTTTTGA CCTTCGCCAC CGACTTCCAG
GCGGTACCGC TCAACCTGTA CCAGAATTTT CGATCGAAAC CGCGCTTGCG CCGTATGCAA
AACGCCATGG TTCGGGTCAT GGACCCTGCG GCTGCGGTGC CGGACGACAT GCTGATGGGT
CCTGGCGGCT CAGTGGACGT GCTGCACTTT AGCGACAGCG CCGAAGAAGC GCGCGAAATC
GCCGACCTGG TGCAGCACTG GATCGGCATT GAAAGCATTC CACCATCGGA GATCGCCGTA
CTCCTCTCCA GGCAACCGGA TCTTTATGCC GAATTGTTGA TGAACGAATT TAAACGGCGC
GGTATCGCGT TTCGTAACGA ACAGCTCCTG CAGGACTTGT CGGTGGAACC TGCTGCACGG
CTGATTGTCG ACTTCCTGAC AGTCGTTGCC GGCGAGCGTC AGTCGGCTGC GTTCGGTCGG
CTGATGGATG TTCTGATTGC AACAGGAATT GACGAAGAAA CGGCTTATGA ACAGAGGTCT
CGATGGCTGC GCTTCCTTGA GCAGTCACGT CGGGCCATGC GCGGCGGCCA AGCCCAGCCG
CTGAATGCGA TTTCCTTGCG GGCGAATGCG ATGACGTTCT TAAAAATGCT CGGCCGGGAA
GCGGTTGTGG CGCTCTCATC TGACTACGAG CGCGGAGACC GGCTGACCGA GGTTGTAGCG
CAAACTTTTG ACCGACTCAC GGAACTTCTC GGAGGCGAAG CCGATCCTGT CCGTGCCTTG
TCGCACTTCT CCGAGGACAG TGCCGTACGC ATCATGACGA TCCACAAGTG CAAAGGTCTG
GAGTTCGATA CGGTTGTGAT ACTGGGAGTG GAACAGCAGA CGTTTTGGGG TGACAGGGAT
GAACAACGAT CCGCGTTTTT CGTGGGCATC TCGCGCGCCA AGAGTCGGCT TTACCTGACC
GTAGCCGACC AGAGACAACG GCCTACAGAA GCACAGAATC GATGGGATAT TGTGAGGAGG
CCCCATGACG AATACATCGG GTATGCCACC TCGTCTGTCG GCTGA
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| Protein sequence | MIKPQAWLPS DGLTLEPNAL LAAQEVLRSL ALTAGPGAGK TEMLAQRADF LLRTGTSRYP
QRILAISFKV DASRNLKDRV RKRCGAELAA RLDSHTFHAF AKRIIDRFRP ILTGRDALNP
DYTIGVGRVQ GQQLDFGNLV PLAVQILKAC PIACNAVRQT YSHVFLDEFQ DCTDEQYQLI
KVAFLGSSAR LTAVGDTKQR IMGWAGALEG VFLTFATDFQ AVPLNLYQNF RSKPRLRRMQ
NAMVRVMDPA AAVPDDMLMG PGGSVDVLHF SDSAEEAREI ADLVQHWIGI ESIPPSEIAV
LLSRQPDLYA ELLMNEFKRR GIAFRNEQLL QDLSVEPAAR LIVDFLTVVA GERQSAAFGR
LMDVLIATGI DEETAYEQRS RWLRFLEQSR RAMRGGQAQP LNAISLRANA MTFLKMLGRE
AVVALSSDYE RGDRLTEVVA QTFDRLTELL GGEADPVRAL SHFSEDSAVR IMTIHKCKGL
EFDTVVILGV EQQTFWGDRD EQRSAFFVGI SRAKSRLYLT VADQRQRPTE AQNRWDIVRR
PHDEYIGYAT SSVG
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