| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4251 |
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| Symbol | |
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| ID | 4685307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 124072 |
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| End bp | 125946 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826111 |
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| Product | phage integrase family protein |
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| Protein accession | YP_973276 |
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| Protein GI | 121582834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT GCCCTATTCG GAAATCTCCA ATGAAATCAA CGCCCTTTTT TGCGCCCACC
AAGTACGTGA TGAAAATCGG TCTTCATCAC TTCGCTCATT TGCGTGCGAT TGCCGAAGGC
GTCGATGCGC GGGAGGCCGG CAAGCTGTAC CTCGGGGTCG AGCACGGACA CGAAGCGATT
ACCGCAAGCC GACAGACCAT TGAAGCAGTC AGGTCCATAG CAAGGCGTCA TGGCGAGAAA
TCGGCCTGGC GGCTCATCGG GCTGACCGTC AAGCCGAAGA CGGTGGCGTT TTTGAAGTCC
GTCGAAGATG GCTTCGTCAA TATCGACAAG GCGCGAATGC CTTCTCTTGA GCAATACATT
GAAGAGCACG ATCTGGACGA TTGGGGCGCG GCAGAAGTGC TGGAGATGTA CAGGGATGCC
TACCCAGCGT CGGAAAAAGG CGTCGCATCC AGTACCAGGC GGAACCGCTT GCGCCAGCGC
CAGCTCGCTC TGCTGTCCAA GCTTGAAGCA TTGAGCGCTG AAGTTCCCAC CGAAAGTGAT
CCCGTGGCCG GCTGGTTCGA TGACGTGACT GCCTCCAAGC TGGTCACAGC GGGCTTGATC
AACCTGGGCA TGCTGCGCCA GGCCATCGAC TCGGCAGGCC GCTGGTACAG ATTCATGCCC
GGTGTCGGCA AACTCAAGGC GGAGCGGATC GCGCAGTTCC TCGGCTCGAT CATGCCCGCC
ACAGCAGCGA GCACCCGGCC GGCCTTCGCC CTCGCAATGA TGCCCTCGCA ATACACGCCC
TACCGCGAAA TCCAAACCAT TGAAAGTCCT GCATGCGGGT CAACGCCTAT TTTGTCCGGC
AGTTCGGTTC TCAAGGCCGA TAACGATATG GACGCAGTTA ATGCCTGGAT AGCAGCGCGC
TCTGGCTCCA AACTCACCGC GACTGTTTAC TTGCGTGAAG CTGTGCGCTT AATGCTGTGG
CTGCAGCAGG AGCGTCACGC AATTGGATTC AAGGACATGA CGGTCGAGGA CTGTTTGGCG
TATATGGCCT TCTTGCAGAA CATACCCCCG AGCTGGATTT CTCGGCGCAA AGCCAAGCCC
TTTGAAGCGG GGTGGGCTCC ATTTCGTGGC CAGCTCAGCC ACGACAGCCA CCGCCAGTCG
GTCATTGTGG TTTCAGCATT ATTCCTCTGG CTTCACTCAG CCTCTTACAT TAACCAGAAT
CCCTGGGTTT TGGTTAATAG AAAAACAGGC GATGATAAAA ACCGAATAGT CAAGGAAAGC
AAATCCATCA GCGAATTCGG CTATTCCGAA ATAATCCGTT ATATAGATGC ACAACCACCA
ACTGCGGCCA GTGAACGGAT TCGGTTTATT TTCAAGTTCC TCGAAGCAGT CGGACTGCGT
TCCATGGAAT TTCTACATGC ACGGCTCAAG GATTTTGACA AACAGCCCGA GGGCTGGGTT
TTGTATGTGC ATGGCAAGGG CGCAAAAAAC CGCTATGTTT TTATCCCGAA TCAGGCATTT
GAAGCTCTGC AACGCTATTT GCAATTCCGG GGGCTTGGCG GCATAGAAAC TGCCGACCCG
AAAGCACCCT TAATATCCAG TACGCTTGAT TCGATGGAGC CAGTAGGCTA CCGGCCGTTT
TACCAGCATG TCAAATCGTG GACGCTGCGC GCAATTCAAT ACTCGACACT TCCCGCCAAA
GAACGAACCC AGCTCGAACG GGCCTCACCC CACTGGCTCA GACATACGTT CGGCGCCCGA
TCAGTCGCAA GGGACGTAGC CATGGATGCG ATCCAGGCGC AGATGGGCCA TGCCAGCATT
GAAACAACCA TGTCGATCTA TGGGCGTGCG CCGCTTAAAC GGCGTGCTGA AGAGCTAAGC
AAAGCTTTTA CATAA
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| Protein sequence | METCPIRKSP MKSTPFFAPT KYVMKIGLHH FAHLRAIAEG VDAREAGKLY LGVEHGHEAI
TASRQTIEAV RSIARRHGEK SAWRLIGLTV KPKTVAFLKS VEDGFVNIDK ARMPSLEQYI
EEHDLDDWGA AEVLEMYRDA YPASEKGVAS STRRNRLRQR QLALLSKLEA LSAEVPTESD
PVAGWFDDVT ASKLVTAGLI NLGMLRQAID SAGRWYRFMP GVGKLKAERI AQFLGSIMPA
TAASTRPAFA LAMMPSQYTP YREIQTIESP ACGSTPILSG SSVLKADNDM DAVNAWIAAR
SGSKLTATVY LREAVRLMLW LQQERHAIGF KDMTVEDCLA YMAFLQNIPP SWISRRKAKP
FEAGWAPFRG QLSHDSHRQS VIVVSALFLW LHSASYINQN PWVLVNRKTG DDKNRIVKES
KSISEFGYSE IIRYIDAQPP TAASERIRFI FKFLEAVGLR SMEFLHARLK DFDKQPEGWV
LYVHGKGAKN RYVFIPNQAF EALQRYLQFR GLGGIETADP KAPLISSTLD SMEPVGYRPF
YQHVKSWTLR AIQYSTLPAK ERTQLERASP HWLRHTFGAR SVARDVAMDA IQAQMGHASI
ETTMSIYGRA PLKRRAEELS KAFT
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