| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4199 |
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| Symbol | |
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| ID | 4685211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 76284 |
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| End bp | 77012 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826059 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_973224 |
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| Protein GI | 121582782 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.481376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.72742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCATCCTCGC CATTGCCGCC GCAGCGTTGG TGACCCTGAT GCCCGTCGCA
CACGCGCAGT GGGTCGTGAT CGATCCGTCC AACCTGGCCC AGAACATCAT GACGGCCGCG
CGCACGCTGG AGCAGATCAA CAACCAGATC AGGCAGCTCC AGAATCAGGC GCAGTCGCTG
ATGAACCAGG CGAAGAACCT CACCGGTCTG GACTTCAGCG CGTTGAATGA ACTGCGTGCG
TCGCTGTCGG CGACCAACCA GCTTATCCAG CAGGCGCAAG GCCTGGCGTT CAACGTGTCG
CAAATGGAGA CCGAATTCCA GCGGCTCTAC CCTGATGCGT ATTCCGCCTC CATCTCGGGA
ACTCAGATGA CGACCGACGC GCGTTCGCGC TGGCGCAACT CGCTTGAAGC GTTGCGCACC
GCGACCAAGG TGCAGTCGCA AGCCGTACAG AACTTCGCCT CCGATGAGCA GACGCTGACG
GACTTGGTGA ACCGCAGCCA GTCGGCGGTC GGCGCTTTGC AGGCCACACA GGCGACCAAC
CAGTTGCTGG CCTTGCAGGC GCGGCAGTCG ATCCAGGCGC AGCAACTGCA AATCACGCAG
GACCGCGCCA CCGCGCTGGA ACAGGCGCGT GTCATCGCGG CGCAGGAACG TGCGCGCGAA
GTGCGCCGCC GCTTCCTGGG TGAGGGCACG CCGTATACGC CGCAGACCAT CGATTTCTAC
AGGAACTGA
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| Protein sequence | MKKTILAIAA AALVTLMPVA HAQWVVIDPS NLAQNIMTAA RTLEQINNQI RQLQNQAQSL
MNQAKNLTGL DFSALNELRA SLSATNQLIQ QAQGLAFNVS QMETEFQRLY PDAYSASISG
TQMTTDARSR WRNSLEALRT ATKVQSQAVQ NFASDEQTLT DLVNRSQSAV GALQATQATN
QLLALQARQS IQAQQLQITQ DRATALEQAR VIAAQERARE VRRRFLGEGT PYTPQTIDFY
RN
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