| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4647 |
|---|
| Symbol | |
|---|
| ID | 4668014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5174977 |
|---|
| End bp | 5175453 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825843 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_972956 |
|---|
| Protein GI | 120613278 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAC TCGACAAATT CGACATCGCC ATCCTCGCGG AACTGCAGGC CGATGCACGG
CTGACGAACG CCGAGCTGGC GCAGCGCGTG GGCCTCTCCG CCGCCCCGTG CTGGCGACGC
GTGCGGGCCC TGGAAGAGGC GGGCTTCATC AAGGGCTACC ACGCGGAGAT CGATCGCCAC
CGGATCGGCC TGGGCGTGCT GGCCTTCGTG CGGCTGGATG CCGACCGCAG CACCGGCGGC
CTCACGCGCG AGATGGAAGA GGCCATCGCC AAGATCCCGG AAGTGGTCGC CTGCCACTAC
ATCAGCGGCA CCGGGACGTT CGAGTTGCAG GTGGTGGCGC GCGACCTGGA GAGCTTTTCG
CAATTTGCGC GCGGCGTGCT GCTGAACCTG CCCAACGTGA AGGACATGCA CACGAGCTTT
TCGCTGGGGG AGGTGAAGGC GGGAGGGGCG CTGCCGCTGG CGCATTTGCA GCGATGA
|
|---|
| Protein sequence | MEELDKFDIA ILAELQADAR LTNAELAQRV GLSAAPCWRR VRALEEAGFI KGYHAEIDRH
RIGLGVLAFV RLDADRSTGG LTREMEEAIA KIPEVVACHY ISGTGTFELQ VVARDLESFS
QFARGVLLNL PNVKDMHTSF SLGEVKAGGA LPLAHLQR
|
|---|
| |