| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4608 |
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| Symbol | |
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| ID | 4665573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5127263 |
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| End bp | 5128423 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639825806 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_972919 |
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| Protein GI | 120613241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACG ACGCCCCCTC CACCGCCTCC CTCCTGTCCT GGCTCCGCGA CGAAACCGTC
TGGGGCCTCT CGCTGTCGAG CATCGCGCTG GCCGTCGCCT CGGCGCTGGG CGTGTACCTG
GGCATCACGC TGCTGCTGGG CGTGGCGCAG CGGCGCACCC GGCGGCTCGC CGAGGCGCGC
GCGGCGCAGG GGCGCGAAGG GGCGGGCAGC GTGGCGGCCG TGGCCGCCGA AGTGCTGGGC
GGCACCAGCC ACCTGCTGAT CCTGCTGGTG GCGCTGCTGG TCGGCGTGGG CATGCTGGAC
CTGGCGCCGC GCTGGCAGGC GCGCGTGGGG CAGCTCTGGT TCATCGCGCT GGCGCTGCAG
ATGGCGCTGT GGGGAACGCG CGCGATCGGC ATCGCCATCC GGCGCTATGA GGCGCGGCAC
CTGGGGGCGC CGTCGGTGCA GGTGAGCGCC TCGGGAACGC TGATGTCCTG GGGGTTGCGC
ACCTTGCTAT GGGCCACCAT CGTGCTGGCG ATGCTCGCCA ATCTCGGGGT CAACATCACG
GCCTTCGTGG CGAGCCTGGG CGTGGGCGGC ATCGCCATCG CCCTGGCCGT GCAGAACGTG
CTGGGCGATC TTTTCGCCTC GCTGGCCATC GCGGTGGACA AGCCCTTCGA AGTGGGCGAT
TTCATCGTGG TGGGCAGCGT GGCGGGCACG GTGCAGCGCA TCGGCGTGAA GACCACGCGC
ATCCGCAGCC TGGGCGGCGA GCAGATCGTG ATGTCCAACA CCGACCTGCT CAAGCAGACC
ATCAACAACT ACCGCTACCT GCAGGAGCGG CGCATCGTCT TCACCTTCTC CGTGAGCTAC
GCCACCACCG CGGCGCAGGC CGAGGCCGTC GCCCGGGCGG TGCAGCGCAT CATCGAGGCG
CAGGACAAGG TGCGCTTCGA CCGCGCGCAC CTCAAGGGCT TCGGCGCCAA TGCGCTCGAA
TACGAGGTGG TCTATATCGT GCTGGACGCG GGCTACAACG CCTACATGGA CGTGCAGCAG
GCCATCAATC TCGCGATCCT GCGCGAGCTG GGTACGCTGG GCGTGCAGTT CGGCGTGCCC
GTGCGCCAGG TGCAGATGGT TCCCCCCGCG CGTGCCGACG TCCCGGAGGC CGGCGGTTCT
TCCCAGGAGG TGTCCCCATG A
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| Protein sequence | MLNDAPSTAS LLSWLRDETV WGLSLSSIAL AVASALGVYL GITLLLGVAQ RRTRRLAEAR
AAQGREGAGS VAAVAAEVLG GTSHLLILLV ALLVGVGMLD LAPRWQARVG QLWFIALALQ
MALWGTRAIG IAIRRYEARH LGAPSVQVSA SGTLMSWGLR TLLWATIVLA MLANLGVNIT
AFVASLGVGG IAIALAVQNV LGDLFASLAI AVDKPFEVGD FIVVGSVAGT VQRIGVKTTR
IRSLGGEQIV MSNTDLLKQT INNYRYLQER RIVFTFSVSY ATTAAQAEAV ARAVQRIIEA
QDKVRFDRAH LKGFGANALE YEVVYIVLDA GYNAYMDVQQ AINLAILREL GTLGVQFGVP
VRQVQMVPPA RADVPEAGGS SQEVSP
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