Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4527 |
Symbol | |
ID | 4667622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5031223 |
End bp | 5031876 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639825716 |
Product | putative proline rich signal peptide protein |
Protein accession | YP_972838 |
Protein GI | 120613160 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.330497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGC AGGGTTGGCG CGCGCGCCTG CAGGCCGCAT GGGGCTCGGC CTGGCGCCAT GCCTGCTGGA CGCTCCTGCT GTGCCTGGGG CTCTGGCTGT CCCTGCCGGG GCCGGCCGCC GCGCAGGCCG GAGCCGGCGA GATCACCGAC CTGAAGCTGG AGGCAGCGGA CACCGGCCTG TACCTGTCGG CCGCCCTGCA TTTCGAGTTG CCGGACCTGG CGGAGGATGC GCTGCTCAAG GGCATCACTC TCTATTTCGT GGAGGAGGCC GAGGTGCTGC GGGAGCGCTG GTACTGGTCC GACAAGACCG TCGCGCGCGC CACGCGCTAT CTGCGGCTGA GTTACCAGCC CCTCACGCGC CGCTGGCGGC TCAACCAGTC CACGATGCCG TTTCCGGCGA GCGGGCTGGG CGTGGCGCTG GGCCAGAGCT ATGACGAGCT GGAGGAGGCG CTGTTGGCGA TGCAGCGCAT CGCCCGCTGG AAGATCGCCG ATATCGACGA CATCGACCGC CAGGCCGCGC ACCTGGTGCA CCTGCGCTTC CGGCTCGACA TGTCGCAGCT GCCGAGGCCG TTCCAGATCG GCGCCATGGG GCGCTCCGGA TGGGACCTCG CGATTTCCCG CGCCGAACGC CTGGTCATCG AGCCGCAGCC ATGA
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Protein sequence | MPAQGWRARL QAAWGSAWRH ACWTLLLCLG LWLSLPGPAA AQAGAGEITD LKLEAADTGL YLSAALHFEL PDLAEDALLK GITLYFVEEA EVLRERWYWS DKTVARATRY LRLSYQPLTR RWRLNQSTMP FPASGLGVAL GQSYDELEEA LLAMQRIARW KIADIDDIDR QAAHLVHLRF RLDMSQLPRP FQIGAMGRSG WDLAISRAER LVIEPQP
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