| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4448 |
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| Symbol | |
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| ID | 4666277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4943669 |
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| End bp | 4945705 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639825639 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_972762 |
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| Protein GI | 120613084 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.634501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.211596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCTG CGCTGGCGGC CTGGGCGCAG GACGTGCCCG GTGCCGCCCG CGGCGATGGC
GCTGCGGCGC TCCACGCTCC CGTGCAGGCC GGCCCCGCGC TCACGCTGGG AACGGTGGAG
GTGCGCGAGG GCCCCGGCGG CGCGCTGCCG GCGCGCAGCG TGTCCACATC GGTGGACATC
GTGGGCGGCG AGGTGCTGCA GGATGCCCGC GTGGACCATT CCTGGGAACT GCTGGGCCGC
GCGCCCGGGG TGCAGGTCAC GCCGTTCCGA CAGGGGACGG ACGCGGGGCG GTTCTCCTTC
CGCGGCTTCA ATGGCGAGGG CCGGGTGAAT GCCGTCAAGC TGCTGATCGA CGGGATCCCG
TCGAACGACA ACGCGGGCGG TATGCCGTTC CTGGATGCGG TGTTCCCGCT CGATATCGAG
GCGTTGGAGG TGGTGCGCGG CACGAACGAC CCGCGCTACG GGCTCCACAA CATCGCGGGC
AACGTGAACG TGATCACGCG CACGGGCGGC AACGAGGGCC GCGCGACGCT GACGGCGGGC
AGCTTCGGCA CGCGCGACCT GCAGGTGGTC AAAGGCATCG AGTCGGGGCC GTGGAGCCAG
AACTACGGCG TGTTCTGGCG CACGGGCGAC GGCTGGCGCG ACCATGCGGA AGGCACGCAG
CGTGCGCTGT CGGGCAAGTG GTTTTACACC GATCCGGGCG GCGGCTGGCG CGCAGGCCTC
ACAGCGCGCT ATTTCCGCAA TGCGGCGGAT GAGTCCGGCT ACCTGACGCG CGAGCAGGCG
GCGGCGCAGC CGCGCTGGTC GCCGCCGTGG TCGGCCTCGG ACCGCAGCAC GCGCGAGACC
GGGCAACTGG GGCTGCACTG GGAGGCCGAG CTGGCCGAGC GGCTGTCTTG GACGGCGCGC
GCGTACGCCA ACCATTACGA GAACCAGCGC TGGGTGCGGT TCTCGCAGGC GGGCGTGCAG
CAGGAGCGCG ACAACGACGA GGACCAGCGC GGGCTGTCGG GCGTGCTGAC GTGGCGGCCC
GCGGTGGCCT GGGCGCACGC GTTCACGCTG GAAGGCGGGG TGGACGCGCA GTGGCAGGAC
AACGCCGCGC AGCGCTGGCG CACGGCCGGG CACGTGCACA CTTCGCAGTT CCGGGACTGG
GATTTCGACG TGCATACGCA GGGGGCGTAC GTGCAGGCGG TGGTGCAGCC GGTGGCGTCG
CTGCGCATCG TGCCGGCGCT GCGCGTGGAC CGGCTGGGCG GAGATTTCTC GGACCGGCTG
ACGGGGCAGC GCTACGGCAT GCACGATTAC GGCACCATCC GCCAGCCCAA GCTGGGCGTG
GCCTGGACGG CCCGCGAGGG CGTGACGCTG TATGCGAATG CGGGCCGCAC CTTCCAGGTG
GGCACGGGCA TCGACGCCTA CCGCACGCAG GCGCGCGACC TGGGCCCGTC GATCAACGAC
GGATGGGAGA CGGGCGTGCG CTGGCAGCCC GCGCCGGGCT GGGAGGCGCG CGTGGCCACA
TGGCAGCAGC GCGCGTCGGG CGAGGTCGCG CGCGTGCTGG GCGTGGACGG GCTGCCCGAT
CCCGGCGGGC TGGGCAACGT GGGACGCACG CGGCGCAAGG GCTGGGACGC GCAGCTCAAC
GCCCGCCTGG GCGCGCGCTG GACGGGCTGG GTCGCCTATT CGCACCAGGT GGCGCGCATC
ACCGTGCCCG ATCCGTCGGC GCCGGACACC GCCGGGCGGG AGGTGGAGAA CGTGCCGCGC
TACCTGGCGA GCGCGGGCGT GCAGGTGCGC GCCACGGAGG TGCTGCGCCT GTCGGCCACG
GTGACGGCGC AGGGCGACTA TTACCTGGAC CGCACCAACA CCCAGGGCCG CGCGGGGCGC
TACGCGCTGC TGGATCTGGG CGCGACCTGG CAGCTCTCGC CCGTGGCGGA TGTGAGCGTG
CAGGTGCGCA ACGCGACGAA TCGCCGTTAC GTCTATGCGT GGTATGACAG CGGCTCCTCG
GGCTATTCGC CGGGCGACGG CCGCAGCGTC GCCGTCAGCC TGGGCTGGAG GTTCTGA
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| Protein sequence | MLPALAAWAQ DVPGAARGDG AAALHAPVQA GPALTLGTVE VREGPGGALP ARSVSTSVDI
VGGEVLQDAR VDHSWELLGR APGVQVTPFR QGTDAGRFSF RGFNGEGRVN AVKLLIDGIP
SNDNAGGMPF LDAVFPLDIE ALEVVRGTND PRYGLHNIAG NVNVITRTGG NEGRATLTAG
SFGTRDLQVV KGIESGPWSQ NYGVFWRTGD GWRDHAEGTQ RALSGKWFYT DPGGGWRAGL
TARYFRNAAD ESGYLTREQA AAQPRWSPPW SASDRSTRET GQLGLHWEAE LAERLSWTAR
AYANHYENQR WVRFSQAGVQ QERDNDEDQR GLSGVLTWRP AVAWAHAFTL EGGVDAQWQD
NAAQRWRTAG HVHTSQFRDW DFDVHTQGAY VQAVVQPVAS LRIVPALRVD RLGGDFSDRL
TGQRYGMHDY GTIRQPKLGV AWTAREGVTL YANAGRTFQV GTGIDAYRTQ ARDLGPSIND
GWETGVRWQP APGWEARVAT WQQRASGEVA RVLGVDGLPD PGGLGNVGRT RRKGWDAQLN
ARLGARWTGW VAYSHQVARI TVPDPSAPDT AGREVENVPR YLASAGVQVR ATEVLRLSAT
VTAQGDYYLD RTNTQGRAGR YALLDLGATW QLSPVADVSV QVRNATNRRY VYAWYDSGSS
GYSPGDGRSV AVSLGWRF
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