| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4405 |
|---|
| Symbol | |
|---|
| ID | 4666812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4895622 |
|---|
| End bp | 4897076 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639825596 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_972719 |
|---|
| Protein GI | 120613041 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCG TCGTCATAGG AAACGGCATC GTCGCCCTCT CCACGGCTTT CAGGCTCATG
CAACGGCTGG GGCCCCATGA CCAGATCACC TTGATAGGTC CGCGGGCCCG GCCCGGCTCC
GCTACCCAGG CGGCTGCGGC AATGCTCAAT TCATTCGCGG AAATCGAAGC GGGAGGTCTG
GAACACCCCG TCGATCTCTT CCGCTTCGAG CTCAGCCATC TGGCCACCCG CATGTGGCCC
CGGTTCGAGC GCGAGATCAT CGATCAGGCG GGAGGGTGCC TGCCCGCCGA CTGCGGGCAC
TGTACCGGCT TTGGCGGAGG CGGCTGCATC GATACGGGCA CATTCGTCAT CAATAATAAT
GCAGCAGACG ATCTGGACGA TGAAAATTTC GAGGCCATCG CCACGGCCCT GGACGATTTC
AGCGAACCCT ACGAATACGT CTCGCCTCGC AGCATTCCCA ATTACCGGCC ACACCAGGGG
CAACGCGCCG TGCGAGCCCT ATTCATACCG GGCGAAGGCT GGGTCAATCC GCGGCTGATG
CTGGAAAAGC TCGACATGGT GGTCGGGCGC CATCCGCGGG TGAGATTCCT GGAGGCCAGT
GCACAACGTC TCCAGCACGG CCATGGATCC ATCACCGGCG TGGTCCTGAA CAATGCGCAG
GTGGTGGAGG CGGACAAGTT CGTGCTGGCG ACAGGGGCAT CTGCCTGGGA CCTGCTGCAG
CGCAGCGACC TGGACATCGG CATGCAGCGG GTGTTCTATG GCGTCGGCGT ATCTCTGGAA
ATCGAGAGCC CCGACAATCC CCATACCCAC TGCATTCGCA CACCGAACCG AGGGCTGGCG
TGCGGCGTCT ACAGCGCACC CTACTTCACA GGCCCCCGTC GGCCGACCGA CCACATTCTC
ATAGGGGCCA GCAGTTTCAC ATCGGCGACC CCCGTGGAGC ACGCCCGCAT CGGCAGCGTG
GAGTCCCTGT TGAAATCCGC CATGGAGCAG ATCAACCGCG ATTTCTACCG GGCCTCCCTG
GTCCGTGTGA ACGTGGGCTG GCGGCCCAGC AGCCAGGACG GATATCCCAT GGTAGGGCCG
ACGGCGCTTC ACAATCTCAT CGTCGCCACG GGGACCAAGC GCGACGGCTT CCACATGGCA
CCGGTCCTCT CCCAGTATCT GGCGGGACTC GTTCATGGCG ATCCCCTCCC CGACGAGCGC
TGGAACTGGC TGGCCCCCGA TCGCGCGCCG CTGCGGTTGC TGACACGCGA GCAGGCGATC
GCCAAAGCGG TGCGGCACCA GATCAGCGCG GCCTATCAAC ATGGTTTCGT GCCTGCGAAG
AGCCGCATGC CGGACCAACT GGCCGACACC TACCGCAGCC AGCTGGAACA ATTGCATGAC
CAGGTGGGCG CCATCGACTG GGGGATTCCG CCCGATATGC TCGACATGTA CCGGTACGGC
CACGCAAAGG CCTGA
|
|---|
| Protein sequence | MHTVVIGNGI VALSTAFRLM QRLGPHDQIT LIGPRARPGS ATQAAAAMLN SFAEIEAGGL
EHPVDLFRFE LSHLATRMWP RFEREIIDQA GGCLPADCGH CTGFGGGGCI DTGTFVINNN
AADDLDDENF EAIATALDDF SEPYEYVSPR SIPNYRPHQG QRAVRALFIP GEGWVNPRLM
LEKLDMVVGR HPRVRFLEAS AQRLQHGHGS ITGVVLNNAQ VVEADKFVLA TGASAWDLLQ
RSDLDIGMQR VFYGVGVSLE IESPDNPHTH CIRTPNRGLA CGVYSAPYFT GPRRPTDHIL
IGASSFTSAT PVEHARIGSV ESLLKSAMEQ INRDFYRASL VRVNVGWRPS SQDGYPMVGP
TALHNLIVAT GTKRDGFHMA PVLSQYLAGL VHGDPLPDER WNWLAPDRAP LRLLTREQAI
AKAVRHQISA AYQHGFVPAK SRMPDQLADT YRSQLEQLHD QVGAIDWGIP PDMLDMYRYG
HAKA
|
|---|
| |