| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4325 |
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| Symbol | |
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| ID | 4667541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4803928 |
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| End bp | 4804896 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639825511 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_972639 |
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| Protein GI | 120612961 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.107614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TCTCCCTTCC CCTCGGGCCG CGCGCCGCGC GCGGCGCCGT CTGCGCGGCC
TCCGCGCTGG CCCTCGCCTG GCTCGCGGCC TGCACCGACC GCGGCACCCC CGCGCAGATG
CCCGCGCCCG AGGCGCCCGC ATCCGCTCCG GCCGCCGGCG CGGCCACGGG CGTGGCCATC
GCCCGGGGCC GCGTCGAAGT GCAGGGCGGA ATGCTCGAAC TCTCGCCCCT GCAAGAGGGC
GTGGTGGACA CCGTCGCCGT GCACGAAGGC CAGGCCGTGA AGCGCGGACA GGTGCTGCTG
CGCCTGTCCG GCACCGGCCT GCAGGCCGAG GCCGGCGTGG CGCAGGCGGA GCTGCAACTG
GCGGAAGCGC GCGAACGCGC ACGCGCCCAG CAGGTGCCCG CGCTGCGCCG CGCTGCCGCC
CGGCTCGCCG AAGCCGCCGC CGCCAACGCC GCCGAGCCGC AGCGCGCCGA AGATGCCGCC
CAGGCCCTGC GCGCCGCCGA ATCCGACGCC GCCGTGGCGC GCGCGGAGGT CGAAGTGGCG
CGAAAAAAAC TCGCCCAGGT GCGCGGCCAG CAGGCACGCC TCGAACTGCG TGCTCCCGAA
GACGGCACCG TGGTGCATGT CAGGGCCCAG GCCGGCGTAC GCCTGGCTGC CGCAGCCGGC
CATGCCGCGA TCACGCTGCT GCCGCACCGG CCGCTGGTCG TGCGGGCGGA GGTCAACCAG
AACTACGCGG CCGCGGTGAA GCCGGGGATG CGCGCCACGG TCACGACCGA CGGCGACGCC
GCCCCGGTCG CCCTGCCCGC CGCGCGGGTA GTGCGCATCA GTCCCGTGCT CGGCACGTCG
CGGCTGCAGG AGGACGCCCA GCGCGGCCCG ATGCGGGTCG TCGAGTGCGT GCTCGAATTC
GACAGTCCTC CGGAAGCACG CCCCGGGCAG ACCGTGCGCG TGAGCTTCCT TCCCCTGAAG
CAGGAGTGA
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| Protein sequence | MKRLSLPLGP RAARGAVCAA SALALAWLAA CTDRGTPAQM PAPEAPASAP AAGAATGVAI
ARGRVEVQGG MLELSPLQEG VVDTVAVHEG QAVKRGQVLL RLSGTGLQAE AGVAQAELQL
AEARERARAQ QVPALRRAAA RLAEAAAANA AEPQRAEDAA QALRAAESDA AVARAEVEVA
RKKLAQVRGQ QARLELRAPE DGTVVHVRAQ AGVRLAAAAG HAAITLLPHR PLVVRAEVNQ
NYAAAVKPGM RATVTTDGDA APVALPAARV VRISPVLGTS RLQEDAQRGP MRVVECVLEF
DSPPEARPGQ TVRVSFLPLK QE
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