| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4283 |
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| Symbol | |
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| ID | 4665426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4750529 |
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| End bp | 4755568 |
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| Gene Length | 5040 bp |
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| Protein Length | 1679 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825469 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_972597 |
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| Protein GI | 120612919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA AACCCGCCGC CCGCCAGGGC GACTTGACGA AAAAAGGCGG CCCGATCGTC
CAGGGCTCGG CGACGGTGCT GATCGGCTCG GCGGGAGGCG TGGCGTGCTC GGTGTGCCCC
GGGGGCATGG CGGTGGGCAA CCCGGTGAAC CCGGCGCTGG GCGCGAAGGT GCTCACGGGG
GGCGATGAAC TGGACTTCGC GCTGCCCGGG CCATTGCCGC TGGCGTGGCA GCGGGTGTAC
AGCAGCTATG TGAACGCGGA GCATGGCGCG GCGTGCGGGC TGCTGGGGTA TGGGTGGAAG
CTGCCGCTGG AACTGCGGTT GGTACTGCAG GATGAGCGCG CGGTGCTCTT CGATGCATCC
GGGCGGGCGA TCACGTTCGA GGAGCCCTTG CAGCCGGGGC AGGCGCTGCA CAGCAGCAGC
GAGGACCTGT GGCTGTTGCG GGGTGGGGGC ATGGCTGGCT CCACGGCCCC ATCCTCCACG
CCTGCCGAAC TGCTGCCCTG GGCGCAGCAA CCGCGCTGGT CGCACGTGCC GGCGGTGCTG
CGTGCGGACC CGGGCTGCGT GATCGCCGTG CCGGGCGCGG GCGGTGCTGG TGCGCCGGTC
TGGGTGTTCC TGACGGCGGG CGTATCGGGC GACGGAACAG CTTCGGGCCA TGTCCTGCAT
GCCGTGATCG ACCGCTTCGG CCGCAGCCAG CGCTACCAGT GGGGCACGGA AGGCGAACAG
CAGGGCCGCG TCGCAGGCAT CACCGATGGC AGCGGGCGAC GCTATGCGCT GCGCTACGAG
CGCATTGCCC CGGATGCCAC TGCGGCCCGC AAGCCCGGCA AGCCGGATGA GGGCGGACGT
GCACGCCATC CGCTGCTCGG CCCCGATGAC GGCGTACGGC TGGTCGGCGT GGACTGCACC
TTCAACCCGC TCGACCCTGC AGTGATACCC GGCGCGGCCC CGCGCCCGCA ACCCCTGGTG
GGCTACCGCT ACGACAGCGC AGGCAACCTG GCCGAGGTAC TGGGCGCGGA CGGCACCGTG
CTGCGCCGCT TCGGCTACGA CGCATTGCAC CGCATGACCG AGCACCAGGT GCGCCAGGGC
CCCAGGCACC GCTACGTCTA TGAAGACCAG ACCGCGCAGG GCCGCCGCCA GGGATGGGCT
GCCCGCCCGG GCGCCCGCGT GGCCGAGCAG CACAACGAGG AAGGGCTGTC GTACTTCTTC
GACTACGGCG GCGCTCCGGT AGCGGCCGGT GACGGACCTG CCGCCTCGGT GCGCAGCAGC
ACGGTCGTGC GCGACAGCCT GGGCCGCACC ACGACCTACC ACTTCGAGGG CGAAGGGGGG
CTCAAGCGCC TCGTGCGGCT GACAGGCCCG GACGGTGCCG AGCAGAGCTA CCGCCATGAC
AGCGCCGGCC GCAGGTTGTC GGCCACCGAT GCGCTGGGCC GCACCACGTG GTGGCGCTAT
GACGGCGCAG GCCGGCTGCT GGGCGTGCAG GGCCCGGATG GCCGCAGCAC CCAGCAGCGC
TGGGGCGCAG CAGGCAGCGC GCAGGACGGC CTGCTGCTGG CGAGCCAGGA CGCGGCGGGC
CTGCGCACGC ACTACCGCTA CGACGACTGG GGCCGTCTGG TGGAGGTCGC GATGCTGCCG
GAAGGAAGAA CGGACGAGGC GGCAACGCTG CAGGCCCTCA TCACCCGCTT CGAATACGAA
CAGCCCCAGC AGGATGCAGG CACCGGCGCG GTGACATTCC CACCCCACAC GCTCGCCTGG
TGCGACCAGC CCGTGGCGGT GATCGACGCG CAAGGCGGGC GCAGCCAGTA CGCGTACAAC
GCCTGCGGCC AAATCACGCG GCACACCGAC TGCTCCGGCC ACAGCCAGAC ATGGCGCCAC
GGTGCATGGG GCGAGGTAGT GGAAGCGGTG GACGCGCTGG GCCAGCGCAC ACGACTGCAC
CACGCGATGC AGCAAGGCGC ACTGCGGCTG GTGGGCGTGC AGCAGCCGGG CAACACGGCG
GTGCGCTACC GCTGGAACGA AACCGGACGG ATGGCGGCCA TCACCCACGG CACGCACGAC
GTGCTGGAAG GCACGGGCGA GCCCGCGGGC ACCAGCGCCA CCATCGCTTA CCGTCACGAC
CTGTGGGGCC GCGTGGTGGA GCAGGTGCAG GCGGGCCGGG GCGTGCAGCT GCGCTACGAC
GTGGCCGGGC GGCTGCAGGA ACTCGTCAAC GAGAACGGCG ACGTGACGCG CTTCGTGCAC
GATGTGGCCG ACCGGCTGGT GCAGGAAGTG GGGTTCGACG GGCGCAGCCA GGTGTATGGC
TACGACGCTG CGGGCCAGCT CACGCACACG GGCGATGGAC ACGGGGAAGG CCACCACCCG
GGCGCGGCGG CGCGGCCGGA GCTGGGCGCA GTGGTGCGCA CGCGGCTGCA CTACGACCTG
GGTGGCCGAC TGGTGGCGCG TGTCGCCGTG CGGCTGCCGG CCCCGGAGCC CTCCGATACC
GAACCCCACG CGATACTGCA GATCCAGCGC TTCGAACACA CTTCAGCCGG GGCGTTGCAG
CAGACGCGAA CCTGGGAGGC CGAGTTGCCG CACGGCGTCG AACCCATGGC ATCGCCCACG
GGTTCCATGA CCGACCGCCC CATGTCCCTG GCTGGCAGCT GGCTGGCGCT GAATACGCAG
GCCCTGTTGT CCCTGCTGGA CCGCCCGGGC GATCCGGCCC AGGCTCCGCT GGCTGCCGCG
CTGCAGGCGC AGCGTCTGCA GCAGGAAGCC CGCGTAGCCT TCGCGCGCGA TGCCTTCGGA
CGGGTCTGCG GAGAGACGCA GACGCTGTAC CGAGAGCCGC AGGCGCCCCA ACTCCAAGCC
AGCCTGAGTG CCGGTGAGCC CCCCGTGGAG TTCGAGCACG CGATTACCCA CACCCTGGGC
CCGCTGGGCC AGCGCACGGC CACGCAGGCG CAAGGCCTAG GCACGCTGCA GTGGCTGGCC
TACGGCTCGG GCCACGTACA CGGGCTGCTG CTGGACGGCC AGCCGCTGGT GGACTGGGAG
CGCGATGCGC TGCACCGCGA GGTGGGGCGC ACGCTGCACG TGCTCGACGG CCAAGACAAC
GCAGACCTGC CTGCCATCGT GCATGCGCGG CAGTTGGACC CGATGGGCAG GATGCTGCAC
CAGGACTGGC GCGGCCTGCG CCATGCGGCG GCCATGCCGA CGACCGATAA CGCCAACGAC
TCCGATACCG GCCCCTCGTA CGCCGCAGGT CGCATCACCC CGGCCCTGGG CCCGCTCCGA
ACGATCGCGC AGCGACGCTA CCAATACGAT GCGCTGGGCC AGCTAGTGGG CGTGCAGACA
CCTGGTGAGG CCACGCGGTA CGGTTACGAC GCCTGGCAGC GCCTGACTGC AATGCACCGT
GCAGGCCCGG AGGGCGAATT GCATGAGCAC TGGGTACTGG ATGCAGCGGG CAATCGATTG
CCCTCGTTCG GAGGCGCTCA GGCGGCAATA CCGCACGCAG GTCGGCAGCC AGAGGCATGG
GCCCGCGAGG TGCGCGAGAA CTTGCATGAT GCAGGCTTTG ACCTGCTACG CGCGAACGGT
GGTCCAGGCG AGAGCTCGGG CACGGTAACG CACTGGCCAG GCAACCGCAT TGGCTGGAGC
ACTGTCCAGA GAGCGGACAG CCACCAGAAA GACGCTCTAA TCCGCTACCA ATATGACGCT
TTCGGCAACC GGGTGCAGGT GCTGCATCCT GACGGCAGAA TACAACGACT GCATTACGAC
GCGCTGCACC AGTTGCGCGA AGTGTGTCAA CGCGAGCAAC TAGGCGGCGC TTGGCGGCTG
ATTGCCAGCT ACCGGTACGA CGCACTTGGC CGTCGCTTGA GCAAGACCGT GTACGACCAA
TTGGACCATG GCGGGACGAC TACCTATGCG GGATGGGACG GTGACCGACT CATACACACG
GAAGGGGCAA AGGGGTTCTT CCATACGCTC TACGAGCCCG GCTCCTTCGT GCCGTTGCTT
CGCCTGGAAC GCAGCAAAGC CATTCCTACA GCCATGCAGG TGCTGCTGGC GCTGGACAGC
ACTGAAGATG ATGACTCCGA CGCCCCTGCT CTGGGCCGCA ACTTCTTCGC TGCGTTGCCC
AGAGCTCAAC GCGACTTGCT TGAAGGTGTT TTGCATAGCG CCATCGGTAC CTGCGCTGAG
GCTTCGCTCG CGAATCTGTC GTCAAACCTA CCCCTTGATG TCCGCGTATT GCTGGCAAAT
GGTCTTGATG AGATCCGGGG TCGGCGTACC AACTTCGCAC GCGCCGAAGA CACTTGCATA
CGCCACATTC TTTGCGACCA CCTGGGCACG CCCATCGCGA TGGTGGATGC CAACGGACGC
CACTCCGGCC TTCTCACGTG GGCGGCAACA TACCATTCGT GGGGCGCTCT TCGGGAGGAA
TACAACCCGA ACGATATCAG TCAACCCATA AGATTCCAGG GTCAACAATT CGACGCGGAA
ACAGGGCTGC ATTATAATCG ATTAAGATAT TATGATCCTT CATTGGGACA ATATTTAACT
CAGGACCCAA TAGGACTTTT GGGCGGAAAC GATAAATATA TATACCCTGT TTCGCCCACT
GGGTGGATTG ATCCGACAGG GCTGAATCCA CTCGCAGCTT GCGCCGTACC AGGTCCCACT
ATGGCAGCAT GCGCTGTCGC TGCAGAAAAA GCGATGAGTT TATTGGCTCT TGGAACAGCA
GCTTTGGCAA CGGCAATGAT TCCGAGCTCT ACATCACAGA TGAGCGATGC TGAAAGATTG
AGTTCTGCTC ATGAAGCAGC CATGGGCAAT CGCACGGCTC CAGGTTATGG TGGAAATTGC
TCTCCAGAAG AACATGATGC ATTGAGAGAT AAAAAAGAAA AAGCATGCGA CGACGCCAAG
GGATTAAGCT GCCAAAAAGG AGAATTAAAT TATGGTAAAG CAGAGAAAAT ACAAAAATGT
ATTGATGCGA GAATAAATAT AGCCCGCAAG TGCTTCGCTG GCGGAGACGC GGGGCATAAC
GAACAAATAA ATCAATTATT TAGAATCATA GGAAAGTGCA CAGGCCATAA TGCAAGATAA
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| Protein sequence | MSGKPAARQG DLTKKGGPIV QGSATVLIGS AGGVACSVCP GGMAVGNPVN PALGAKVLTG
GDELDFALPG PLPLAWQRVY SSYVNAEHGA ACGLLGYGWK LPLELRLVLQ DERAVLFDAS
GRAITFEEPL QPGQALHSSS EDLWLLRGGG MAGSTAPSST PAELLPWAQQ PRWSHVPAVL
RADPGCVIAV PGAGGAGAPV WVFLTAGVSG DGTASGHVLH AVIDRFGRSQ RYQWGTEGEQ
QGRVAGITDG SGRRYALRYE RIAPDATAAR KPGKPDEGGR ARHPLLGPDD GVRLVGVDCT
FNPLDPAVIP GAAPRPQPLV GYRYDSAGNL AEVLGADGTV LRRFGYDALH RMTEHQVRQG
PRHRYVYEDQ TAQGRRQGWA ARPGARVAEQ HNEEGLSYFF DYGGAPVAAG DGPAASVRSS
TVVRDSLGRT TTYHFEGEGG LKRLVRLTGP DGAEQSYRHD SAGRRLSATD ALGRTTWWRY
DGAGRLLGVQ GPDGRSTQQR WGAAGSAQDG LLLASQDAAG LRTHYRYDDW GRLVEVAMLP
EGRTDEAATL QALITRFEYE QPQQDAGTGA VTFPPHTLAW CDQPVAVIDA QGGRSQYAYN
ACGQITRHTD CSGHSQTWRH GAWGEVVEAV DALGQRTRLH HAMQQGALRL VGVQQPGNTA
VRYRWNETGR MAAITHGTHD VLEGTGEPAG TSATIAYRHD LWGRVVEQVQ AGRGVQLRYD
VAGRLQELVN ENGDVTRFVH DVADRLVQEV GFDGRSQVYG YDAAGQLTHT GDGHGEGHHP
GAAARPELGA VVRTRLHYDL GGRLVARVAV RLPAPEPSDT EPHAILQIQR FEHTSAGALQ
QTRTWEAELP HGVEPMASPT GSMTDRPMSL AGSWLALNTQ ALLSLLDRPG DPAQAPLAAA
LQAQRLQQEA RVAFARDAFG RVCGETQTLY REPQAPQLQA SLSAGEPPVE FEHAITHTLG
PLGQRTATQA QGLGTLQWLA YGSGHVHGLL LDGQPLVDWE RDALHREVGR TLHVLDGQDN
ADLPAIVHAR QLDPMGRMLH QDWRGLRHAA AMPTTDNAND SDTGPSYAAG RITPALGPLR
TIAQRRYQYD ALGQLVGVQT PGEATRYGYD AWQRLTAMHR AGPEGELHEH WVLDAAGNRL
PSFGGAQAAI PHAGRQPEAW AREVRENLHD AGFDLLRANG GPGESSGTVT HWPGNRIGWS
TVQRADSHQK DALIRYQYDA FGNRVQVLHP DGRIQRLHYD ALHQLREVCQ REQLGGAWRL
IASYRYDALG RRLSKTVYDQ LDHGGTTTYA GWDGDRLIHT EGAKGFFHTL YEPGSFVPLL
RLERSKAIPT AMQVLLALDS TEDDDSDAPA LGRNFFAALP RAQRDLLEGV LHSAIGTCAE
ASLANLSSNL PLDVRVLLAN GLDEIRGRRT NFARAEDTCI RHILCDHLGT PIAMVDANGR
HSGLLTWAAT YHSWGALREE YNPNDISQPI RFQGQQFDAE TGLHYNRLRY YDPSLGQYLT
QDPIGLLGGN DKYIYPVSPT GWIDPTGLNP LAACAVPGPT MAACAVAAEK AMSLLALGTA
ALATAMIPSS TSQMSDAERL SSAHEAAMGN RTAPGYGGNC SPEEHDALRD KKEKACDDAK
GLSCQKGELN YGKAEKIQKC IDARINIARK CFAGGDAGHN EQINQLFRII GKCTGHNAR
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