Gene Aave_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4271 
Symbol 
ID4665312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4733460 
End bp4733930 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID639825457 
ProductMarR family transcriptional regulator 
Protein accessionYP_972585 
Protein GI120612907 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0653897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.661065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCC GCACCATCCC GGCCACGGCC CCGCTCCCCG CCCTCCAGCG GCTGGACAGC 
CAGGTCTGCT TCGCCCTCTA TTCGGCGTCG CTGGCGATGA CCAAGCTCTA CAAGCCGCTG
CTCGATGCCG TCGGGCTCAC CTACCCGCAG TACATCGCCA TGCTCGCCCT CTGGGAGCAG
GACGGCATCA CGGTGTCCGA GCTGGGCGAG CGCCTGTGCC TCGACTCGGG CACGCTGACC
CCGCTGCTCA AGCGCATGGA AACTTCCGGG CTCGTCGCCC GCGAGCGCGA TCCCCAGGAC
GAGCGGCGCG TGCGCATCAC CCTCACGGCC GGCGGCCGGG CCCTGCGTGG CCGGGCCGAA
GCGATCCCGC ACTGCGTGCT GGAGCGCAGC CAGTGCACCA TTCCCGAACT GGAGGCGCTG
ACCGCGCAGC TCACGCAGCT GCGCGAACGG CTCTCCCGCA GCCCGGGCTG A
 
Protein sequence
MPSRTIPATA PLPALQRLDS QVCFALYSAS LAMTKLYKPL LDAVGLTYPQ YIAMLALWEQ 
DGITVSELGE RLCLDSGTLT PLLKRMETSG LVARERDPQD ERRVRITLTA GGRALRGRAE
AIPHCVLERS QCTIPELEAL TAQLTQLRER LSRSPG